Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory
sfp-cvs-1.v30.ch3.sourceforge.com:/tmp/cvs-serv5175/10.7/stable/main/finkinfo/sci
Added Files:
phylip.info phylip.patch
Log Message:
Builds on 10.8. Appears not to get along with multiple build jobs, so
backport that to 10.4/ .
--- NEW FILE: phylip.patch ---
diff -N -r -u phylip3.65/src/phylip.h phylip3.65.new/src/phylip.h
--- phylip3.65/src/phylip.h 2005-08-25 23:48:38.000000000 +0200
+++ phylip3.65.new/src/phylip.h 2006-01-24 16:44:54.000000000 +0100
@@ -64,7 +64,7 @@
#define EBCDIC false
#define INFILE "infile"
#define OUTFILE "outfile"
-#define FONTFILE "fontfile" /* on unix this might be /usr/local/lib/fontfile */
+#define FONTFILE "@PREFIX@/share/phylip/fontfile" /* on unix this might be
/usr/local/lib/fontfile */
#define PLOTFILE "plotfile"
#define INTREE "intree"
#define INTREE2 "intree2"
--- NEW FILE: phylip.info ---
Package: phylip
Version: 3.69
Revision: 1
Source: http://evolution.gs.washington.edu/%n/download/%n-%v.tar.gz
Source-MD5: 7ad50618173efc2a471d93bfca22042c
PatchFile: %n.patch
PatchFile-MD5: 225366ccf43f7f825d22f62fe53f4dc3
PatchScript: sed 's|@PREFIX@|%p|g' <%{PatchFile} | patch -p1
Depends: x11
BuildDepends: fink (>= 0.24.12), x11-dev
Conflicts: coreutils-default
UseMaxBuildJobs: false
CompileScript: <<
head -n 7 src/phylip.c > Copyright
cd src && make install
<<
InstallScript: <<
install -d -m 755 %i/bin
install -d -m 755 %i/share/%n
install -m 644 exe/font* %i/share/%n
ln -s font1 %i/share/%n/fontfile
rm -f exe/font*
install -m 755 exe/* %i/bin
<<
DocFiles: doc/ %n.html Copyright
Description: Package of programs for inferring phylogenies
DescDetail: <<
PHYLIP (the PHYLogeny Inference Package) is a package of programs for
inferring phylogenies (evolutionary trees).
Methods that are available in the package include parsimony, distance
matrix, and likelihood methods, including bootstrapping and consensus
trees. Data types that can be handled include molecular sequences, gene
frequencies, restriction sites, distance matrices, and 0/1 discrete
characters.
Complete documentation is available on documentation files that come
with the package.
<<
License: Restrictive
Maintainer: Cyril Gallut <gal...@ccr.jussieu.fr>
Homepage: http://evolution.genetics.washington.edu/phylip.html
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