Update of /cvsroot/fink/dists/10.7/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv30194/sci
Added Files:
fftw3.info fftw3.patch libdap9.info libnc-dap3.info
scientificpython-py.info scientificpython-py.patch
Log Message:
Work on 10.7
--- NEW FILE: libnc-dap3.info ---
Package: libnc-dap3
Version: 3.7.3
Revision: 2
BuildDependsOnly: true
GCC: 4.0
Description: OPeNDAP netCDF Client Library
License: LGPL
Maintainer: Alexander Hansen <alexkhan...@users.sourceforge.net>
Depends: %N-shlibs (= %v-%r), pkgconfig
BuildDepends: <<
gcc44, libdap9 (>=3.7.3-1), libiconv-dev, libcurl4, libxml2,
system-openssl-dev,
libssh2.1, libidn, libgettext3-dev
<<
# Unpack Phase:
Source: http://opendap.org/pub/source/libnc-dap-%v.tar.gz
Source-MD5: b69f3fb1b26b65903e41c2aa832cab34
PatchScript: perl -pi -e 's|ncdump|dncdump|g' ncdump/ncdump.1
# Compile Phase
SetCPPFLAGS: -I%p/lib/system-openssl/include
SetLDFLAGS: -L%p/lib/system-openssl/lib
ConfigureParams: --disable-dependency-tracking
CompileScript: <<
#!/bin/sh -ev
F77=gfortran ./configure %c
# for some reason, the allow_undefined_flag doesn't get set right by configure.
perl -pi.BAK -e 's|-single_module |-single_module -undefined dynamic_lookup |'
libtool
make
<<
# Install Phase:
DocFiles: COPYING COPYRIGHT ChangeLog README README.* NEWS
InstallScript: <<
make install DESTDIR=%d
mv %i/bin/ncdump %i/bin/dncdump
install -d %i/share/man/
install -d %i/share/man/man1
mv %b/ncdump/ncdump.1 %i/share/man/man1/dncdump
<<
SplitOff: <<
Package: %N-shlibs
Depends: <<
libdap9-shlibs (>=3.7.3-1), libcurl4-shlibs, libiconv, libssh2.1-shlibs,
libxml2-shlibs
<<
Files: lib/libnc-dap.*.dylib
Shlibs: %p/lib/libnc-dap.3.dylib 4.0.0 %n (>= 3.5.2-1)
DocFiles: COPYING COPYRIGHT README README.* NEWS
<<
DescDetail: <<
The netCDF Client Library is an alternative implementation of
Unidata's netCDF 3.62 API. Our version adds the capability to
dereference OPeNDAP URLs. You can substitute our version of
the library when linking your application and then simply pass
an OPeNDAP URL in where you would normally use a file name.
<<
DescPackaging: <<
Manually install manpage.
Rename 'ncdump' to 'dncdump' to avoid collisions with netcdf-bin
<<
Homepage: http://opendap.org/download/nc-dods.html
--- NEW FILE: scientificpython-py.patch ---
diff -Nurd -x'*~' ScientificPython-2.7.8.orig/Src/Scientific_netcdf.c
ScientificPython-2.7.8/Src/Scientific_netcdf.c
--- ScientificPython-2.7.8.orig/Src/Scientific_netcdf.c 2007-10-31
12:53:18.000000000 -0400
+++ ScientificPython-2.7.8/Src/Scientific_netcdf.c 2008-06-20
17:59:42.000000000 -0400
@@ -19,7 +19,7 @@
#include "Numeric/arrayobject.h"
#endif
#endif
-#include "netcdf.h"
+#include "libnc-dap/netcdf.h"
#define _NETCDF_MODULE
#include "Scientific/netcdfmodule.h"
diff -Nurd -x'*~' ScientificPython-2.7.8.orig/setup.py
ScientificPython-2.7.8/setup.py
--- ScientificPython-2.7.8.orig/setup.py 2007-11-29 13:07:37.000000000
-0500
+++ ScientificPython-2.7.8/setup.py 2008-06-23 18:07:53.000000000 -0400
@@ -91,14 +91,14 @@
else:
print "Using netCDF installation in ", netcdf_prefix
netcdf_include = os.path.join(netcdf_prefix, 'include')
- netcdf_h_file = os.path.join(netcdf_prefix, 'include', 'netcdf.h')
+ netcdf_h_file = os.path.join(netcdf_prefix, 'include',
'libnc-dap/netcdf.h')
netcdf_lib = os.path.join(netcdf_prefix, 'lib')
ext_modules = [Extension('Scientific_netcdf',
['Src/Scientific_netcdf.c'],
include_dirs=['Include', netcdf_include]
+ arrayobject_h_include,
library_dirs=[netcdf_lib],
- libraries = ['netcdf'],
+ libraries = ['nc-dap','dap'],
extra_compile_args=extra_compile_args)]
try:
--- NEW FILE: libdap9.info ---
Package: libdap9
Version: 3.8.2
Revision: 2
BuildDependsOnly: true
GCC: 4.0
Description: DAP 2.0 C++ SDK
License: LGPL
Maintainer: Alexander Hansen <alexkhan...@users.sourceforge.net>
Depends: %N-shlibs (= %v-%r), pkgconfig
BuildDepends: libcurl4 (>= 7.19.2-2), libxml2, libiconv-dev,
system-openssl-dev, libssh2.1
Conflicts: aplus-fsf-dev
Replaces: aplus-fsf-dev
# Unpack Phase:
Source: http://www.opendap.org/pub/source/libdap-%v.tar.gz
Source-MD5: 0b6f6a1bfb6d64d87395c6581e562178
# Compile Phase
SetCPPFLAGS: -I%p/lib/system-openssl/include
SetLDFLAGS: -L%p/lib/system-openssl/lib
ConfigureParams: --disable-dependency-tracking
CompileScript: <<
#!/bin/sh -ev
./configure %c
# for some reason, the allow_undefined_flag doesn't get set right by configure.
perl -pi.BAK -e 's|-single_module |-single_module -undefined dynamic_lookup |'
libtool
make
<<
# Install Phase:
DocFiles: COPYING COPYRIGHT_* README README.* NEWS
InstallScript: <<
make install DESTDIR=%d
rm %i/lib/charset.alias
<<
SplitOff: <<
Package: %N-shlibs
Files: lib/libdap*.*.dylib
Depends: libcurl4-shlibs (>= 7.19.2-2), libxml2-shlibs, libiconv,
libssh2.1-shlibs
Shlibs: <<
%p/lib/libdap.9.dylib 10.0.0 %n (>= 3.8.2-1)
%p/lib/libdapclient.3.dylib 4.0.0 %n (>= 3.8.2-1)
%p/lib/libdapserver.6.dylib 7.0.0 %n (>= 3.8.2-1)
<<
DocFiles: COPYING COPYRIGHT_* README README.* NEWS
<<
DescDetail: <<
A C++ SDK which contains an implementation of DAP 2.0,
Client- and Server-side support classes and a prototype
implementation of the AIS.
<<
DescPackaging: <<
libcurl4 uses system-openssl, so we can also use
system-openssl. By not inheriting or causing our own a
dependency on fink's openssl, we can stay out of
section:crpyto.
<<
DescPort: <<
Had to remove a charset.alias file, as that is only supposed to
be installed by gettextN
<<
Homepage: http://www.opendap.org/download/libdap++.html
--- NEW FILE: scientificpython-py.info ---
Info2: <<
Package: scientificpython-py%type_pkg[python]
Version: 2.9.0
Revision: 1
Distribution: (%type_pkg[python] = 23) 10.4, (%type_pkg[python] = 24) 10.4,
(%type_pkg[python] = 24) 10.5
Type: python (2.3 2.4 2.5 2.6 2.7)
Maintainer: Kurt Schwehr <goat...@users.sourceforge.net>
Depends: <<
libdap9-shlibs,
libnc-dap3-shlibs (>= 3.7.3-1),
numpy-py%type_pkg[python],
python%type_pkg[python]
<<
BuildDepends: <<
fink (>= 0.24.12-1),
libdap9,
libnc-dap3 (>= 3.7.3-1)
<<
Replaces: scientificpython
#
# Warning! There is this strange number right after the php that really
controls what is downloaded!
#
Source:
https://sourcesup.cru.fr/frs/download.php/2372/ScientificPython-%v.tar.gz
Source-MD5: babbbb708d235094d75478bdeb8d4c7f
PatchFile: %{ni}.patch
PatchFile-MD5: ee9fdbc23b851d11cc86b0d94b1c2270
CompileScript: <<
%p/bin/python%type_raw[python] setup.py build --numpy --netcdf_prefix=%p
<<
InstallScript: <<
%p/bin/python%type_raw[python] setup.py install --root %d --netcdf_prefix=%p
mkdir -p %i/share/doc/%n/HTML
mkdir -p %i/share/doc/%n/PDF
mv %i/bin/bsp_virtual %i/bin/bsp_virtual%type_raw[python]
mv %i/bin/task_manager %i/bin/task_manager%type_raw[python]
ln -s %p/bin/bsp_virtual%type_raw[python] %i/bin/bsp_virtual
ln -s %p/bin/task_manager%type_raw[python] %i/bin/task_manager
cp -R Examples %i/share/doc/%n
cp -R Doc/* %i/share/doc/%n
<<
SplitOff: <<
Package: scientificpython-py%type_pkg[python]-bin
Conflicts: <<
scientificpython-py22-bin,
scientificpython-py23-bin,
scientificpython-py24-bin,
scientificpython-py25-bin
<<
Replaces: <<
scientificpython-py22-bin,
scientificpython-py23-bin,
scientificpython-py24-bin,
scientificpython-py25-bin
<<
Depends: scientificpython-py%type_pkg[python] (= %v-%r)
Files: bin/bsp_virtual bin/task_manager
DocFiles: README LICENSE
<<
License: OSI-Approved
DocFiles: README LICENSE
Description: Python modules for scientific computing
DescDetail: <<
In this collection you will find modules that
cover basic geometry (vectors, tensors, transformations, vector and
tensor fields), quaternions, automatic derivatives, (linear)
interpolation, polynomials, elementary statistics, nonlinear
least-squares fits, unit calculations, Fortran-compatible text
formatting, 3D visualization via VRML, and two Tk widgets for
simple line plots and 3D wireframe models.
There are also interfaces to the netCDF library.
The netCDF module is OPeNDAP enabled, that is URLs for
OPeNDAP/DODS servers can be opened like regular netCDF disk files.
<<
DescPackaging: <<
Use libnc's netcdf instead of netcdf itself because it's better.
<<
#Homepage: http://starship.python.net/crew/hinsen/scientific.html
Homepage: http://sourcesup.cru.fr/projects/scientific-py
<<
--- NEW FILE: fftw3.patch ---
--- fftw-3.2.1/tests/Makefile.in.orig 2009-02-09 19:50:28.000000000 -0500
+++ fftw-3.2.1/tests/Makefile.in 2009-04-11 17:47:34.000000000 -0400
@@ -232,9 +232,9 @@
@COMBINED_THREADS_FALSE@@SMP_TRUE@LIBFFTWTHREADS =
$(top_builddir)/threads/libfftw3@PREC_SUFFIX@_threads.la
@SMP_FALSE@LIBFFTWTHREADS =
bench_SOURCES = bench.c hook.c fftw-bench.c fftw-bench.h
-bench_LDADD = $(LIBFFTWTHREADS) \
+bench_LDADD = $(top_builddir)/libbench2/libbench2.a $(LIBFFTWTHREADS)
\
$(top_builddir)/libfftw3@PREC_SUFFIX@.la \
-$(top_builddir)/libbench2/libbench2.a $(THREADLIBS)
+$(THREADLIBS)
all: all-am
--- fftw-3.2.1/tools/Makefile.in.orig 2009-02-09 19:50:28.000000000 -0500
+++ fftw-3.2.1/tools/Makefile.in 2009-04-11 17:50:17.000000000 -0400
@@ -246,10 +246,10 @@
@COMBINED_THREADS_FALSE@@SMP_TRUE@LIBFFTWTHREADS =
$(top_builddir)/threads/libfftw3@PREC_SUFFIX@_threads.la
@SMP_FALSE@LIBFFTWTHREADS =
fftw@PREC_SUFFIX@_wisdom_SOURCES = fftw-wisdom.c
-fftw@PREC_SUFFIX@_wisdom_LDADD = $(top_builddir)/tests/bench.o \
+fftw@PREC_SUFFIX@_wisdom_LDADD = $(top_builddir)/tests/bench.o
$(top_builddir)/libbench2/libbench2.a \
$(top_builddir)/tests/fftw-bench.o $(LIBFFTWTHREADS) \
$(top_builddir)/libfftw3@PREC_SUFFIX@.la \
-$(top_builddir)/libbench2/libbench2.a $(THREADLIBS)
+$(THREADLIBS)
all: $(BUILT_SOURCES)
$(MAKE) $(AM_MAKEFLAGS) all-am
--- NEW FILE: fftw3.info ---
Package: fftw3
Version: 3.2.2
Revision: 3
Maintainer: Sebastien Maret <bma...@users.sourceforge.net>
Source: ftp://ftp.fftw.org/pub/fftw/fftw-%v.tar.gz
Source-MD5: b616e5c91218cc778b5aa735fefb61ae
BuildDepends: fink (>= 0.24.12-1), gcc46, ocaml
Depends: %N-shlibs (= %v-%r)
BuildDependsOnly: True
License: GPL
PatchFile: %n.patch
PatchFile-MD5: 9d79b2581d6a32989c93ff7a78b7e6a0
ConfigureParams: --enable-shared --enable-threads --enable-fortran
--mandir='${prefix}/share/man' --infodir='${prefix}/share/info'
GCC: 4.0
CompileScript: <<
#!/bin/sh -ev
gcclib=`%p/bin/gfortran --print-lib`
FLIBDIR=`dirname $gcclib`
if [ %m != "powerpc" ]; then
FC=%p/bin/gfortran FLIBS="-L${FLIBDIR}" ./configure %c --without-gcc-arch
else
FC=%p/bin/gfortran FLIBS="-L${FLIBDIR}" ./configure %c
fi
make
<<
InstallScript: <<
#!/bin/sh -ev
make -j1 install prefix=%i
mkdir -p %i/share/doc/%n/html/FAQ
cp doc/html/*html %i/share/doc/%n/html
cp doc/FAQ/fftw-faq.html/*html %i/share/doc/%n/html/FAQ
make clean
if [ %m != "powerpc" ]; then
./configure %c --enable-float --without-gcc-arch
else
./configure %c --enable-float --enable-altivec
fi
make
make -j1 install prefix=%i
<<
SplitOff: <<
Package: %N-shlibs
Files: lib/libfftw3.*.dylib lib/libfftw3_threads.*.dylib
lib/libfftw3f.*.dylib lib/libfftw3f_threads.*.dylib
Shlibs: <<
%p/lib/libfftw3.3.dylib 6.0.0 %n (>= 3.2.1-1)
%p/lib/libfftw3_threads.3.dylib 6.0.0 %n (>= 3.2.1-1)
%p/lib/libfftw3f.3.dylib 6.0.0 %n (>= 3.2.1-1)
%p/lib/libfftw3f_threads.3.dylib 6.0.0 %n (>= 3.2.1-1)
<<
DocFiles: README NEWS TODO COPYING INSTALL COPYRIGHT AUTHORS CONVENTIONS
<<
DocFiles: README NEWS TODO COPYING INSTALL COPYRIGHT AUTHORS CONVENTIONS
InfoDocs: fftw3.info
Description: Discrete Fourier Transform Lib (Ver 3)
DescDetail: <<
FFTW is a C subroutine library for computing the discrete Fourier
transform (DFT) in one or more dimensions, of arbitrary input size,
and of both real and complex data (as well as of even/odd data,
i.e. the discrete cosine/sine transforms or DCT/DST).
Benchmarks, performed on on a variety of platforms, show that FFTW's
performance is typically superior to that of other publicly available
FFT software, and is even competitive with vendor-tuned codes. In
contrast to vendor-tuned codes, however, FFTW's performance is
portable: the same program will perform well on most architectures
without modification. Hence the name, "FFTW," which stands for the
somewhat whimsical title of "Fastest Fourier Transform in the West."
<<
DescUsage: <<
Version 3 API is incompatible with Version 2 API (provided by fftw package)
<<
DescPackaging: <<
Single and double precision libs built, single precision libs have
altivec support.
Originally packaged by Jeffrey Whitaker.
<<
Homepage: http://www.fftw.org
------------------------------------------------------------------------------
Magic Quadrant for Content-Aware Data Loss Prevention
Research study explores the data loss prevention market. Includes in-depth
analysis on the changes within the DLP market, and the criteria used to
evaluate the strengths and weaknesses of these DLP solutions.
http://www.accelacomm.com/jaw/sfnl/114/51385063/
_______________________________________________
Fink-commits mailing list
Fink-commits@lists.sourceforge.net
http://news.gmane.org/gmane.os.apple.fink.cvs
