Update of /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci
In directory vz-cvs-3.sog:/tmp/cvs-serv3611
Modified Files:
r-base.info r-base.patch
Log Message:
User feedbacks
Index: r-base.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/r-base.patch,v
retrieving revision 1.1
retrieving revision 1.2
diff -u -d -r1.1 -r1.2
--- r-base.patch 1 Aug 2009 16:58:37 -0000 1.1
+++ r-base.patch 31 May 2011 13:10:48 -0000 1.2
@@ -1,25 +1,120 @@
---- r-base/r-base.csh Thu May 9 05:55:35 2002
-+++ r-base/r-base.csh Thu May 9 05:50:37 2002
-@@ -0,0 +1,3 @@
-+# r-base.csh
-+
-+setenv R_HOME @PREFIX@/Library/Frameworks/R.framework/Resources
---- r-base/r-base.sh Thu May 9 05:55:35 2002
-+++ r-base/r-base.sh Thu May 9 05:50:37 2002
-@@ -0,0 +1,4 @@
-+# r-base.sh
-+
-+R_HOME=@PREFIX@/Library/Frameworks/R.framework/Resources
-+export R_HOME
---- r-base/configure.orig 2006-12-10 09:32:31.000000000 -0700
-+++ r-base/configure 2006-12-10 09:34:35.000000000 -0700
-@@ -30141,7 +30141,8 @@
+diff -ruN R-2.12.0-orig/Makeconf.in R-2.12.0/Makeconf.in
+--- R-2.12.0-orig/Makeconf.in 2010-10-30 15:40:06.000000000 +0900
++++ R-2.12.0/Makeconf.in 2010-10-30 15:41:20.000000000 +0900
+@@ -83,7 +83,7 @@
+ READLINE_LIBS = @READLINE_LIBS@
+ SED = @SED@
+ SHELL = @R_SHELL@
+-SHLIB_EXT = @SHLIB_EXT@
++SHLIB_EXT = .dylib
+ SHLIB_CFLAGS = @SHLIB_CFLAGS@
+ SHLIB_FFLAGS = @SHLIB_FFLAGS@
+ SHLIB_LD = @SHLIB_LD@
+diff -ruN R-2.12.0-orig/Makefile.fw R-2.12.0/Makefile.fw
+--- R-2.12.0-orig/Makefile.fw 2010-10-30 15:40:06.000000000 +0900
++++ R-2.12.0/Makefile.fw 2010-10-30 16:05:35.000000000 +0900
+@@ -37,27 +37,27 @@
+ ln -f -s -n Versions/Current/Resources Resources)
+ @## the resulting libR will point dyld to the fat libR regardless of
its origin
+ @(cd "$(R_FRAMEWORK_DIR)/Resources/lib" && \
+- install_name_tool -id
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/libR.dylib"
$(Rexeclibdir)/libR.dylib)
++ install_name_tool -id
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/libR.dylib"
$(Rexeclibdir)/libR.dylib)
+ @( otool=otool ; if otool -D "$(Rexeclibdir)/libR.dylib"|grep 'not an
object'>/dev/null; then otool=otool64; fi; \
+ for lib in Rlapack Rblas R; do \
+ if test -e "$(Rexeclibdir)/lib$${lib}.dylib"; then $(ECHO) "
lib$${lib}"; \
+ find "$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/" -name
'*.so' -or -name '*.dylib' | \
+ xargs -n 1 install_name_tool -change \
+ `$${otool} -L $(Rexeclibdir)/lib$${lib}.dylib |sed -n -e '2
s/.\(.*\) (compat.*/\1/p'` \
+-
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib" ; \
++
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
; \
+ find "$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/" -name
'*.so' -or -name '*.dylib' | \
+ xargs -n 1 install_name_tool -change lib$${lib}.dylib \
+-
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib" ; \
+- install_name_tool -id
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib" \
++
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
; \
++ install_name_tool -id
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
\
+ "$(Rexeclibdir)/lib$${lib}.dylib"; \
+ if [ "$(Rexeclibdir)" !=
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib" ]; then \
+- $(top_srcdir)/tools/updatefat
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
"$(Rexeclibdir)/lib$${lib}.dylib"; \
+- install_name_tool -id
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib" \
++ $(top_srcdir)/tools/updatefat
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
"$(Rexeclibdir)/lib$${lib}.dylib"; \
++ install_name_tool -id
"@PREFIX@/Library/Frameworks/R.framework//Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
\
+
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"; \
+ fi; \
+ for rexe in `ls
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)"/Resources/bin/exec/*/R
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/bin/exec/R" 2>/dev/null`;
do \
+ install_name_tool -change lib$${lib}.dylib \
+-
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
"$$rexe" ; \
++
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/lib$${lib}.dylib"
"$$rexe" ; \
+ done; \
+ fi; \
+ done)
+@@ -66,7 +66,7 @@
+ chmod a+r
$(R_FRAMEWORK_DIR)/Versions/Current/PrivateHeaders/config.h; \
+ find $(R_FRAMEWORK_DIR)/Versions/Current/PrivateHeaders -name .svn |
xargs rm -rf)
+ @(install_name_tool -change libR.dylib \
+-
"$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/libR.dylib" \
++
"@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/libR.dylib"
\
+ $(Rexecbindir2)/R)
+ @(if [ -n "${R_ARCH}" ]; then \
+ rm -rf $(R_FRAMEWORK_DIR)/Versions/Current/PrivateHeaders${R_ARCH} &&
\
+diff -ruN R-2.12.0-orig/configure R-2.12.0/configure
+--- R-2.12.0-orig/configure 2010-10-30 15:40:06.000000000 +0900
++++ R-2.12.0/configure 2010-10-30 15:53:48.000000000 +0900
+@@ -25402,7 +25402,7 @@
+ main_ld="${CC}"
+ shlib_ld="${CC}"
+ shlib_cxxld="${CXX}"
+-SHLIB_EXT=".so"
++SHLIB_EXT=".dylib"
+ SHLIB_LIBADD=
+ use_exportfiles=no
+
+@@ -25952,7 +25952,8 @@
DYLIB_EXT=".dylib"
dylib_ldflags="${darwin_dylib_ldflags}"
MAJR_VERSION=`echo "${PACKAGE_VERSION}" | sed -e "s/[\.][1-9]$/.0/"`
- LIBR_LDFLAGS="-install_name libR.dylib -compatibility_version
${MAJR_VERSION} -current_version ${PACKAGE_VERSION}
-headerpad_max_install_names"
-+ #LIBR_LDFLAGS="-install_name libR.dylib -compatibility_version
${MAJR_VERSION} -current_version ${PACKAGE_VERSION}
-headerpad_max_install_names"
++ # LIBR_LDFLAGS="-install_name libR.dylib -compatibility_version
${MAJR_VERSION} -current_version ${PACKAGE_VERSION}
-headerpad_max_install_names"
+ LIBR_LDFLAGS="-dynamiclib -single_module -install_name
${prefix}/R.framework/Versions/${PACKAGE_VERSION}/Resources/lib/libR.dylib
-compatibility_version ${MAJR_VERSION} -current_version ${PACKAGE_VERSION}
-headerpad_max_install_names"
RLAPACK_LDFLAGS="-install_name libRlapack.dylib -compatibility_version
${MAJR_VERSION} -current_version ${PACKAGE_VERSION}
-headerpad_max_install_names"
## don't use version in libRblas so we can replace it with any BLAS
implementation
RBLAS_LDFLAGS="-install_name libRblas.dylib -headerpad_max_install_names"
+diff -ruN R-2.12.0-orig/src/nmath/standalone/Makefile.in
R-2.12.0/src/nmath/standalone/Makefile.in
+--- R-2.12.0-orig/src/nmath/standalone/Makefile.in 2010-10-30
15:40:11.000000000 +0900
++++ R-2.12.0/src/nmath/standalone/Makefile.in 2010-10-30 16:08:55.000000000
+0900
+@@ -125,7 +125,7 @@
+ install: installdirs install-header @WANT_R_FRAMEWORK_FALSE@ install-pc
+ @WANT_R_FRAMEWORK_FALSE@ @!(test -f $(libRmath_la)) || $(SHELL)
$(top_srcdir)/tools/copy-if-change $(libRmath_la)
$(DESTDIR)$(libdir)/$(libRmath_la)
+ @WANT_R_FRAMEWORK_FALSE@ @!(test -f libRmath.a) || $(SHELL)
$(top_srcdir)/tools/copy-if-change libRmath.a $(DESTDIR)$(libdir)/libRmath.a
+-@WANT_R_FRAMEWORK_TRUE@ @!(test -f $(libRmath_la)) || cp $(libRmath_la)
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la) &&
install_name_tool -id
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la)
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la)
++@WANT_R_FRAMEWORK_TRUE@ @!(test -f $(libRmath_la)) || cp $(libRmath_la)
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la) &&
install_name_tool -id
@PREFIX@/Library/Frameworks/R.framework/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la)
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/$(libRmath_la)
+ @WANT_R_FRAMEWORK_TRUE@ @!(test -f libRmath.a) || $(SHELL)
$(top_srcdir)/tools/copy-if-change libRmath.a
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib/libRmath.a
+
+ install-strip: installdirs install-header install-pc
+@@ -149,12 +149,12 @@
+ @WANT_R_FRAMEWORK_TRUE@ @$(MKINSTALLDIRS)
$(R_FRAMEWORK_DIR)/Versions/$(FW_VERSION)/Resources/lib
+
+ ## ?= is not portable make syntax, so we conditionalize this.
+-@WANT_R_FRAMEWORK_TRUE@RMATH_FRAMEWORK_DIR ?=
/Library/Frameworks/Rmath.framework
++@WANT_R_FRAMEWORK_TRUE@RMATH_FRAMEWORK_DIR ?=
$(DESTDIR)/Library/Frameworks/Rmath.framework
+ install-Rmath-framework: $(libRmath_la)
+ @(cd ../../include; $(MAKE) Rmath.h)
+ @$(MKINSTALLDIRS) $(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Headers
+ @cp $(libRmath_la) $(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Rmath
+- @install_name_tool -id $(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Rmath
$(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Rmath
++ @install_name_tool -id
@PREFIX@/Library/Frameworks/Rmath.framework/Versions/$(VERSION)/Rmath
$(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Rmath
+ @$(SHELL) $(top_srcdir)/tools/copy-if-change ../../include/Rmath.h
$(RMATH_FRAMEWORK_DIR)/Versions/$(VERSION)/Headers/Rmath.h
+ @rm -f $(RMATH_FRAMEWORK_DIR)/Versions/Current
$(RMATH_FRAMEWORK_DIR)/Headers $(RMATH_FRAMEWORK_DIR)/Rmath
+ @ln -sf $(VERSION) $(RMATH_FRAMEWORK_DIR)/Versions/Current
+diff -ruN R-2.12.0-orig/src/scripts/R.sh.in R-2.12.0/src/scripts/R.sh.in
+--- R-2.12.0-orig/src/scripts/R.sh.in 2010-10-30 15:40:11.000000000 +0900
++++ R-2.12.0/src/scripts/R.sh.in 2010-10-30 15:57:53.000000000 +0900
+@@ -1,6 +1,8 @@
+ #!@R_SHELL@
+ # Shell wrapper for R executable.
+
++# export PATH=@PREFIX@/var/lib/fink/path-prefix-10.6:$PATH
++
+ R_HOME_DIR=
+ if test "${R_HOME_DIR}" = "@prefix@/@LIBnn@/R"; then
+ case "@R_OS@" in
Index: r-base.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/stable/main/finkinfo/sci/r-base.info,v
retrieving revision 1.4
retrieving revision 1.5
diff -u -d -r1.4 -r1.5
--- r-base.info 19 Jan 2010 05:47:09 -0000 1.4
+++ r-base.info 31 May 2011 13:10:48 -0000 1.5
@@ -1,36 +1,46 @@
+Info2: <<
Package: r-base
-Version: 2.7.0
-Revision: 2
-Maintainer: Thomas Kho <t...@tommykho.com>
-Depends: bzip2-shlibs, gcc44-shlibs, libgettext3-shlibs, libiconv,
libjpeg-shlibs, libpng3-shlibs, pcre-shlibs, readline5-shlibs, tcltk
-BuildDepends: fink (>= 0.28.1), bzip2-dev, gcc44, libgettext3-dev,
libiconv-dev, libjpeg, libncurses5, libpng3, pcre, readline5, tcltk-dev,
tetex-base, texinfo, x11-dev
+Version: 2.13.0
+Revision: 1
+Description: Environment for statistical computing
+Maintainer: BABA Yoshihiko <babayoshih...@mac.com>
+Depends: bzip2-shlibs, gcc44-shlibs, libgettext8-shlibs, libiconv,
libjpeg-shlibs, libpng3-shlibs, pcre-shlibs, readline5-shlibs, tcltk
+BuildDepends: fink (>= 0.28.1), bzip2-dev, gcc44, libgettext8-dev,
libiconv-dev, libjpeg, libncurses5, libpng3, pcre, readline5, tcltk-dev, x11-dev
+#BuildDepends: tetex-base, texinfo
Source: http://cran.r-project.org/src/base/R-2/R-%v.tar.gz
-Source-MD5: 9eaee3eceec1d5f72cea5640ca90768c
+Source-MD5: ecfb928067cfd932e75135f8b8bba3e7
PatchFile: %n.patch
-PatchFile-MD5: 058152b01af26f4346296555be599d0e
+PatchFile-MD5: 0b80e77b4dc51597ffd8d7ea20168ebb
PatchScript: sed 's|@PREFIX@|%p|g' < %{PatchFile} | patch -p1
SourceDirectory: R-%v
-## TO BE FIXED: all .so files (in Resources/library and Resources/modules) are
in fact dylibs, with wrong install_names
ConfigureParams: <<
- --libdir='%i/lib' --mandir='${prefix}/share/man'
--with-tcl-config=%p/lib/tclConfig.sh --with-tk-config=%p/lib/tkConfig.sh \
- --with-blas="-framework vecLib -dylib_file
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib"
--with-lapack --with-aqua --enable-R-framework=%p/Library/Frameworks \
- --with-x --with-system-bzlib --with-system-pcre --with-system-zlib
--x-includes=/usr/X11R6/include --x-libraries=/usr/X11R6/lib
+ --libdir='%i/lib' --mandir='${prefix}/share/man' \
+ --with-blas="-framework vecLib -dylib_file
/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib:/System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libLAPACK.dylib"
\
+ --with-lapack \
+ --with-aqua --enable-R-framework=%p/Library/Frameworks \
+ --with-system-bzlib --with-system-pcre --with-system-zlib
<<
Conflicts: r-recommended
CompileScript: <<
- #!/bin/sh -ev
+ #!/bin/sh -efv
export F77=%p/bin/gfortran
unset R_HOME
- ./configure %c
+ ./configure %c --with-x --x-includes=/usr/X11R6/include
--x-libraries=/usr/X11R6/lib --with-tcl-config=%p/lib/tclConfig.sh
--with-tk-config=%p/lib/tkConfig.sh
make
- #make check-all
<<
InstallScript: <<
#!/bin/sh -ev
make install prefix=%i/Library/Frameworks
- perl -pi.bak -e 's|%i|%p|g' %i/Library/Frameworks/R.framework/Resources/bin/R
- perl -pi.bak -e 's|%i|%p|g'
%i/Library/Frameworks/R.framework/Resources/etc/Makeconf
- sed -i -e 's|%i|%p|g' %i/lib/pkgconfig/libR.pc
+ perl -pi -e 's|%i|%p|g' %i/Library/Frameworks/R.framework/Resources/bin/R
+ perl -pi -e 's|%i|%p|g'
%i/Library/Frameworks/R.framework/Resources/etc/Makeconf
+ perl -pi -e 's|%i|%p|g' %i/lib/pkgconfig/libR.pc
+ if [[ $( sw_vers -productVersion ) > 10.5 ]];then
+ perl -pi -e 's|# export PATH|export PATH|'
%i/Library/Frameworks/R.framework/Resources/bin/R
+ fi
+
+ # move site-library out of R
+ ln -s %p/lib/R/site-library
%i/Library/Frameworks/R.framework/Resources/site-library
+
mkdir -p %i/bin
ln -s %p/Library/Frameworks/R.framework/Resources/bin/R %i/bin/R
mkdir -p %i/share/man/man1
@@ -39,61 +49,64 @@
FW_VER=`echo %v | sed -e's/[\.][0-9]$//'`
install_name_tool -id
"%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/lib/libR.dylib"
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/lib/libR.dylib
ln -s %p/Library/Frameworks/R.framework/Versions/$FW_VER
%i/Library/Frameworks/R.framework/Versions/%v
- mkdir -p %i/etc/profile.d
- install -m 755 r-base.sh %i/etc/profile.d/
- install -m 755 r-base.csh %i/etc/profile.d/
-
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/class/libs/class.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/class/libs/class.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/cluster/libs/cluster.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/cluster/libs/cluster.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/foreign/libs/foreign.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/foreign/libs/foreign.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grDevices/libs/grDevices.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grDevices/libs/grDevices.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grid/libs/grid.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grid/libs/grid.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/KernSmooth/libs/KernSmooth.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/KernSmooth/libs/KernSmooth.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/lattice/libs/lattice.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/lattice/libs/lattice.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/MASS/libs/MASS.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/MASS/libs/MASS.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/methods/libs/methods.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/methods/libs/methods.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/mgcv/libs/mgcv.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/mgcv/libs/mgcv.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nlme/libs/nlme.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nlme/libs/nlme.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nnet/libs/nnet.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nnet/libs/nnet.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/rpart/libs/rpart.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/rpart/libs/rpart.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/spatial/libs/spatial.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/spatial/libs/spatial.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/splines/libs/splines.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/splines/libs/splines.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/stats/libs/stats.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/stats/libs/stats.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/survival/libs/survival.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/survival/libs/survival.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tcltk/libs/tcltk.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tcltk/libs/tcltk.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tools/libs/tools.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tools/libs/tools.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/internet.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/internet.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/lapack.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/lapack.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/R_X11.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/R_X11.so
- install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/vfonts.so
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/vfonts.so
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/class/libs/class.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/class/libs/class.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/cluster/libs/cluster.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/cluster/libs/cluster.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/foreign/libs/foreign.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/foreign/libs/foreign.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grDevices/libs/grDevices.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grDevices/libs/grDevices.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grid/libs/grid.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/grid/libs/grid.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/KernSmooth/libs/KernSmooth.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/KernSmooth/libs/KernSmooth.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/lattice/libs/lattice.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/lattice/libs/lattice.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/MASS/libs/MASS.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/MASS/libs/MASS.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/Matrix/libs/Matrix.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/Matrix/libs/Matrix.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/methods/libs/methods.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/methods/libs/methods.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/mgcv/libs/mgcv.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/mgcv/libs/mgcv.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nlme/libs/nlme.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nlme/libs/nlme.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nnet/libs/nnet.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/nnet/libs/nnet.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/rpart/libs/rpart.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/rpart/libs/rpart.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/spatial/libs/spatial.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/spatial/libs/spatial.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/splines/libs/splines.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/splines/libs/splines.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/stats/libs/stats.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/stats/libs/stats.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/survival/libs/survival.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/survival/libs/survival.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tcltk/libs/tcltk.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tcltk/libs/tcltk.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tools/libs/tools.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/library/tools/libs/tools.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/internet.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/internet.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/lapack.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/lapack.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/R_X11.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/R_X11.dylib
+ install_name_tool -id
%p/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/vfonts.dylib
%i/Library/Frameworks/R.framework/Versions/$FW_VER/Resources/modules/vfonts.dylib
+
+ # To keep the library folder safe. Users can install their libraries in
$HOME/Library/R.
+ chmod 555 %i/Library/Frameworks/R.framework/Resources/library
+<<
+RuntimeVars: <<
+ R_HOME: %p/Library/Frameworks/R.framework/Resources
<<
Shlibs: <<
- %p/Library/Frameworks/R.framework/Versions/2.7/Resources/lib/libR.dylib 2.7.0
%n (>= 2.7.0-1)
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/class/libs/class.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/cluster/libs/cluster.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/foreign/libs/foreign.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/grDevices/libs/grDevices.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/grid/libs/grid.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/KernSmooth/libs/KernSmooth.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/lattice/libs/lattice.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/MASS/libs/MASS.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/methods/libs/methods.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/mgcv/libs/mgcv.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/nlme/libs/nlme.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/nnet/libs/nnet.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/rpart/libs/rpart.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/spatial/libs/spatial.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/splines/libs/splines.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/stats/libs/stats.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/survival/libs/survival.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/tcltk/libs/tcltk.so
-
!%p/Library/Frameworks/R.framework/Versions/2.7/Resources/library/tools/libs/tools.so
- !%p/Library/Frameworks/R.framework/Versions/2.7/Resources/modules/internet.so
- !%p/Library/Frameworks/R.framework/Versions/2.7/Resources/modules/lapack.so
- !%p/Library/Frameworks/R.framework/Versions/2.7/Resources/modules/R_X11.so
- !%p/Library/Frameworks/R.framework/Versions/2.7/Resources/modules/vfonts.so
+ %p/Library/Frameworks/R.framework/Versions/2.12/Resources/lib/libR.dylib
2.12.0 %n (>= 2.12.0-1)
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/class/libs/class.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/cluster/libs/cluster.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/foreign/libs/foreign.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/grDevices/libs/grDevices.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/grid/libs/grid.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/KernSmooth/libs/KernSmooth.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/lattice/libs/lattice.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/MASS/libs/MASS.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/Matrix/libs/Matrix.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/methods/libs/methods.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/mgcv/libs/mgcv.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/nlme/libs/nlme.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/nnet/libs/nnet.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/rpart/libs/rpart.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/spatial/libs/spatial.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/splines/libs/splines.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/stats/libs/stats.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/survival/libs/survival.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/tcltk/libs/tcltk.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/library/tools/libs/tools.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/modules/internet.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/modules/lapack.dylib
+ !%p/Library/Frameworks/R.framework/Versions/2.12/Resources/modules/R_X11.dylib
+
!%p/Library/Frameworks/R.framework/Versions/2.12/Resources/modules/vfonts.dylib
<<
-Description: Environment for statistical computing
DescDetail: <<
R is similar to S, which was developed at Bell Laboratories by John
Chambers et al. It provides a wide variety of statistical and
@@ -118,3 +131,4 @@
<<
License: GPL
Homepage: http://cran.R-project.org/
+<<
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