Update of /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci
In directory sc8-pr-cvs17.sourceforge.net:/tmp/cvs-serv32363
Modified Files:
emboss.info emboss.patch
Log Message:
upstream patch
Index: emboss.patch
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.patch,v
retrieving revision 1.8
retrieving revision 1.9
diff -u -d -r1.8 -r1.9
--- emboss.patch 5 Dec 2007 00:18:26 -0000 1.8
+++ emboss.patch 17 Jan 2008 02:46:48 -0000 1.9
@@ -22,6 +22,42 @@
am__libajaxg_la_SOURCES_DIST = ajgraph.c ajhist.c
@[EMAIL PROTECTED] = $(am__objects_2)
libajaxg_la_OBJECTS = $(am_libajaxg_la_OBJECTS)
+diff -Naur EMBOSS-5.0.0/ajax/ajindex.c EMBOSS-5.0.0-patched/ajax/ajindex.c
+--- EMBOSS-5.0.0/ajax/ajindex.c 2007-07-06 08:18:48.000000000 -0400
++++ EMBOSS-5.0.0-patched/ajax/ajindex.c 2008-01-09 13:50:33.000000000
-0500
+@@ -2516,7 +2516,14 @@
+
+ static ajint btreeNumIdCompare(const void *a, const void *b)
+ {
+- return (*(AjPBtNumId const *)a)->offset - (*(AjPBtNumId const
*)b)->offset;
++ ajlong val;
++
++ val = (*(AjPBtNumId const *)a)->offset - (*(AjPBtNumId const *)b)->offset;
++
++ if(!val)
++ return 0;
++
++ return (val < 0L) ? -1 : 1;
+ }
+
+
+@@ -11956,8 +11963,14 @@
+
+ static ajint btreeOffsetCompare(const void *a, const void *b)
+ {
+- return (*(AjPBtId const *)a)->offset -
+- (*(AjPBtId const *)b)->offset;
++ ajlong val;
++
++ val = (*(AjPBtId const *)a)->offset - (*(AjPBtId const *)b)->offset;
++
++ if(!val)
++ return 0;
++
++ return (val < 0L) ? -1 : 1;
+ }
+
+
diff -Naur EMBOSS-5.0.0/emboss/psiphi.c EMBOSS-5.0.0-patched/emboss/psiphi.c
--- EMBOSS-5.0.0/emboss/psiphi.c 2007-07-06 08:15:29.000000000 -0400
+++ EMBOSS-5.0.0-patched/emboss/psiphi.c 2007-07-27 05:28:27.000000000
-0400
Index: emboss.info
===================================================================
RCS file: /cvsroot/fink/dists/10.4/unstable/main/finkinfo/sci/emboss.info,v
retrieving revision 1.19
retrieving revision 1.20
diff -u -d -r1.19 -r1.20
--- emboss.info 5 Dec 2007 00:18:26 -0000 1.19
+++ emboss.info 17 Jan 2008 02:46:48 -0000 1.20
@@ -1,6 +1,6 @@
Package: emboss
Version: 5.0.0
-Revision: 4
+Revision: 5
#Distribution: 10.4
Depends: %N-ajax5-shlibs (>= %v-%r), %N-nucleus5-shlibs (>= %v-%r),
%N-plplot5-shlibs (>= %v-%r), x11, x11-shlibs, libpng3-shlibs, libjpeg-shlibs,
gd2-shlibs, system-java14
BuildDepends: libpng3, libjpeg, gd2, libiconv-dev, x11-dev, system-java14-dev
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