Thanks so much, it is working great
On Mon, Mar 7, 2011 at 11:00 PM, Daniel Wheeler
daniel.wheel...@gmail.comwrote:
On Mon, Mar 7, 2011 at 4:14 PM, Julien Derr julien.d...@gmail.com wrote:
depositionRateVariable =
metalVar.getGrad().dot(distanceVar.getGrad())
This should work
Hi Daniel ,
thanks a lot for your help. Yes you are absolutely right, I actually
dowloaded the examplefile .py from a random place on the internet, so I
understand it doesn't match my installation of fipy.
but this is not my real problem. I can just desactivate the parallel option
and it works
I just modified one line in the simpletrenchsystem.py :
here it is
#!/usr/bin/env python
##
# ###
# FiPy - Python-based finite volume PDE solver
#
# FILE: inputSimpleTrenchSystem.py
#
# Author: Jonathan Guyer
2011/3/3 Julien Derr julien.d...@gmail.com
He re is what I get :
julien@derr-Precision-T1500:~/Dropbox/diatomes/videos$ python -c 'import
fipy; print fipy.__version__'
2.2-dev
If you install via package manager, you install in /usr/, if you install
manual, you install in /usr/local/
So I
I did that, and I still have version 2.2
julien@derr-Precision-T1500:~/Dropbox/levelset$ python -c 'import fipy;
print fipy.__version__'
2.2-dev
is it the up to date version ? because I still get the same runtime error.
Julien
On Fri, Mar 4, 2011 at 10:22 AM, Julien Derr
I have
2.2-dev4222
The numer is the svn checkout. Not sure if not working with svn can cause
problems.
I use indeed trunk as in http://www.ctcms.nist.gov/fipy/svn.html so
svn checkout http://matforge.org/svn/fipy/trunk trunk
Note that if you have installed via package manager, you best
Sorry.
On Fri, Mar 4, 2011 at 5:39 PM, Daniel Wheeler
daniel.wheel...@gmail.com wrote:
You can check and see that the example you are trying to run don't not
match your installed version of FIPy by importing the Grid2D instance
and looking at the arguments it takes.
You can check and see
On Fri, Mar 4, 2011 at 5:43 AM, Julien Derr julien.d...@gmail.com wrote:
I did that, and I still have version 2.2
julien@derr-Precision-T1500:~/Dropbox/levelset$ python -c 'import fipy;
print fipy.__version__'
2.2-dev
is it the up to date version ? because I still get the same runtime
He re is what I get :
julien@derr-Precision-T1500:~/Dropbox/diatomes/videos$ python -c 'import
fipy; print fipy.__version__'
2.2-dev
What is the best way to install the up to date version under ubuntu 10.10??
On Thu, Mar 3, 2011 at 1:43 AM, Daniel Wheeler daniel.wheel...@gmail.comwrote:
On Mar 2, 2011, at 6:33 AM, Julien Derr wrote:
the unmodified simpletrenchsystem.py works fine (but it was working fine also
before)
OK, good. I assumed so, but wanted to be sure.
I just had to remove the following line in the definition of the mesh
#
I guess it is version 2.2
I think I installed it with the last .deb file for Ubuntu
In the help, I get this :
FILE
/usr/local/lib/python2.6/dist-packages/FiPy-2.2_dev-py2.6.egg/fipy/__init__.py
On Wed, Mar 2, 2011 at 5:09 PM, Jonathan Guyer gu...@nist.gov wrote:
On Mar 2, 2011, at 6:33
On Wed, Mar 2, 2011 at 12:12 PM, Julien Derr julien.d...@gmail.com wrote:
I guess it is version 2.2
I think I installed it with the last .deb file for Ubuntu
In the help, I get this :
FILE
/usr/local/lib/python2.6/dist-packages/FiPy-2.2_dev-py2.6.egg/fipy/__init__.py
The error suggests
Thanks all of you!!
I installed python-dev, and now I can compile pysparse.
and the tests work better
testSuperlu.py and testUmfpack.py work fine now,
but still a problem with test_spmatrix.py (see bellow)
#
On Mar 1, 2011, at 5:22 AM, Julien Derr wrote:
I installed python-dev, and now I can compile pysparse.
Good!
and the tests work better
Good!
testSuperlu.py and testUmfpack.py work fine now,
Good!
but still a problem with test_spmatrix.py (see bellow)
Hmmm
ANyways, now, when I
indeed!
I have a segmentation fault when I run the test!
I am going to reinstall pyspare or maybe another version ??
julien@derr-Precision-T1500:~/Téléchargements/pysparse-1.1.1/Test$ python
testSuperlu.py
TestRelErr Tolnnz(A) nnz(L+U)Fact Solve
which installation of pysparse would you suggest ?
I have currently 1.1.1
I tried to install pysparse-1.2-dev203 or pysparse-1.2-dev213, but I have
errors at the installation;
first in the spmatrixmodule.c : there is a weird beginning of function
DL_EXPORT(void)
initspmatrix(void)
{
On Feb 24, 2011, at 9:23 AM, Julien Derr wrote:
If I use easy_install, it install the version 1.1 only
Hmmm, right. You can direct easy_install to get newer ones with, e.g.
easy_install https://pysparse.svn.sourceforge.net/svnroot/pysparse/trunk
but I agree with Wheeler. You should
On Feb 24, 2011, at 11:02 AM, Julien Derr wrote:
Thanks a lot Daniel and Jonathan for your help,
but unfortunately, I think I've tried everything without success...
* sudo apt-get install python-sparse
tells me I have the up to date distribution
Is there a way to query what version it
I might be behind a firewall or proxy, at university.
here is the full error I get : (as I said before there is already something
which looks obviously wrong like missing {} or integer function returning
void ?)
julien@derr-Precision-T1500:~/Téléchargements/pysparse$ sudo python setup.py
I am running pysparse on kubuntu 10.10 from subversion (version 1.2a1).
No errors in the tests.
I do have python-dev installed as I use weave in some projects.
Benny
2011/2/24 Jonathan Guyer gu...@nist.gov
On Feb 24, 2011, at 11:58 AM, Julien Derr wrote:
I might be behind a firewall or
Hi everyone,
I guess I understand where is the problem in my last post: I am a little bit
lost in the classes
I am just modifying the simpletrenchSystem.py example file. I would like the
extension velocity to be proportional to the gradient of the metalVar field.
in the example,
On Feb 23, 2011, at 10:01 AM, Julien Derr wrote:
I guess I understand where is the problem in my last post: I am a little bit
lost in the classes
I am just modifying the simpletrenchSystem.py example file. I would like the
extension velocity to be proportional to the gradient of the
thanks a lot Daniel and Jonathan, I understand now the situation.
I replaced the line with
depositionRateVariable = metalVar.getGrad().dot(distanceVar.getGrad())
Unfortunately it seems there is an additional problem as it creates now a
segmentation fault :
[derr-Precision-T1500:09248] ***
On Feb 23, 2011, at 12:35 PM, Julien Derr wrote:
Unfortunately it seems there is an additional problem as it creates now a
segmentation fault :
:
:
[derr-Precision-T1500:09248] [ 1] /usr/lib/libsuperlu.so.3(dpivotL+0x16d)
[0x7fa5dac6fa9d]
[derr-Precision-T1500:09248] [ 2]
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