Re: [Fis] Revisiting the Fluctuon Model

2010-09-28 Thread Joseph Brenner
Dear Koichiro,

Your peripheral remarks were not so to me, but exactly the further grounding 
in physics that I for one feel necessary. I would like to focus on two 
statements I found particularly relevant:

 If information has anything significant in its own right and can stand alone 
 irrespective of  whether or how it may become analytically accessible, on the 
 other hand, one must go beyond  the stipulation of the standard model.

The logical system I am proposing does nothing too far outside the standard 
model. It focuses on the dualities and self-dualities of energy as 
metaphysically significant, with the inherent oppositional relation - 
distinguishable co-existing actualities and potentialities - as the basis for 
information.

...why not take up carbon chemistry as one more concrete example going beyond 
the hurdle? So  far as we know, there has been no attempt for determining  
both carbon compounds as the building pieces of biology and chemical affinity 
latent in them in a mutually consistent manner.

Logic in Reality provides a consistent interpretation of the latent affinity 
of chemical compounds in terms of residual unsaturated potentialities that 
are the resultant of those of the atoms, which result in turn from those at the 
lowest quantum level. This reality is equivalent to the information carried to 
higher levels of complexity that is necessary for the emergence of new forms 
and processes. It is the latent affinity (potentiality) of 
carbon-nitrogen-oxygen-sulfur compounds that enable them to be the building 
blocks of biology.

The reason that I call this approach a logic rather than just a restatement 
of the underlying chemical physics is that one maintains its principles when 
entering the epistemological domain, eliminating as far as possible the barrier 
between epistemology and ontology that has been the source of so much , 
well, difficulty.

Koichiro's note talks to the basic question Kevin and I posed, the reality + 
causal efficacy of fluctuons. More evidence for or against will be easier to 
evaluate with this in hand.

Thank you and best wishes,

Joseph   


  - Original Message - 
  From: Koichiro Matsuno 
  To: fis@listas.unizar.es 
  Sent: Tuesday, September 28, 2010 5:55 AM
  Subject: Re: [Fis] Revisiting the Fluctuon Model


  Folks, 

   

 Kevin Kirby's opening remark on the Fluctuon model of Michael Conrad shed 
light on the role of information in physics and beyond. Here is some peripheral 
remark of my own, though a bit lengthy. 

   

  1)  Practicing physics may look informational in exercising its own 
specification without saying so explicitly. A case in point is the 
renormalization scheme as demonstrated in quantum electrodynamics (QED). QED is 
quite self-consistent in specifying and determining the values of both the 
electric charge of an electron and its mass. Tomonaga-Schwinger have 
successfully set up a descriptive scheme of synchronizing the multiple times 
presiding over the virtual processes which might violate conservation laws in 
between in the light of the uncertainty principle in energy and time. The 
synchronization that is faithful to observing all the relevant conservation 
laws is an act of making both determinations of the mass under the influence of 
the electric charge and of its reversal coincidental, that is, the act of 
making both ends meet. A neat expression of the synchronization is seen in 
Dyson's equation in terms of Feynman's diagram. In short, the physical 
parameter called a mass or an electric charge is internally specified, 
determined and measured as such in the renormalization scheme of QED. So far, 
so good.

   

  2)  Michael felt some uneasiness with the renormalization scheme since 
the notion of information remains redundant and secondary at best there. 
Although the definitive values of the mass and the electric charge might seem 
informational to the experimentalist who intends to measure them externally, an 
electron in QED can already be seen to measure and fix them internally on its 
own. In the physical world describable in one form of renormalized scheme or 
another, that is to say, in the standard model of physics, information is 
merely a derivative from something more fundamental. The standard physicist has 
a good excuse for marginalizing information. If information has anything 
significant in its own right and can stand alone irrespective of whether or how 
it may become analytically accessible, on the other hand, one must go beyond 
the stipulation of the standard model. A notorious case that has strenuously 
kept defying the renormalization project of whatever kind attempted so far is 
quantum gravity, which was Michael's primary concern. Self-consistent scheme of 
justifying quantum gravity is required to reach continuity (gravity) as 
starting from discontinuity (quantum) and at the same time to reach 
discontinuity as starting from continuity even on an 

Re: [Fis] Revisiting the Fluctuon Model

2010-09-28 Thread Pedro C. Marijuan
Dear FISers,

Thanks to Kevin and Joseph for their excellent texts --and to the many 
other responding parties. For my own argumentation purposes I find very 
useful the comments from Stan, Kevin Clark, Koichiro. There are three 
different aspects I would like to deal with. Given my burden of nasty 
complicate tasks, I have to leave them as open questions to try to 
formulate better in the future, or maybe to be kindly dealt with by 
other parties.

About the formalism to deal with entropies: How does the treatment of 
entropies by Michael in his Adaptability Theory --extended by the 
fluctuon model into the microphysical realm-- relate with the 
contemporary quantum information theory, and the qubits stuff? Given 
that it was initially conceived from the ecological perspective, can it 
be connected with Bob Ulanowicz's conceptualization of energy flow and 
diversity (and his tentative variational principle?) The paper by Kevin 
on Biological adaptibilities and quantum entyropies (BioSystems 64, 
2002, 33-41) is an excellent portal for this question.

Gravitation and the quantum--and information. There are plenty of 
theories on quantum gravitation to compare with the ideas in the 
fluctuon model, and to try to link with the information discussion. 
Given the curious biological penchant of Lee Smolin (The Life of the 
Cosmos,1997, Three roads to Quantum Gravity, 2000) and the relative 
clarity of his discussions on string theory and other approaches, I am 
very tempted to take some of his ideas on Calabi-Yau (manifolds) spaces 
as an ultimate Planckian scenario where energy and information collide 
and only elementary distinctions survive. They are communicable in 
some open dimensions, but not in the other closed ones... the idea 
of information as distinction on the adjacent is realized there; also 
in Smolin's discussions on information in black holes, birth of baby 
universes, etc.   Could this frame of thought be put in agreement with 
the formal underpinnings of the fluctuon model --as far as I know, 
inspired by Josephson fluxons or electron solitons in quantum 
tunneling? It goes beyond my reach.

Percolation --and the all pervasive and reverberating circulation of the 
perpetual disequilibrium as Koichiro as put. This aspect of Michael's 
thought was fascinating for me, a vertical but terribly heterogeneous 
scenario of information flows. Given that Joseph and Stan have made neat 
statements from different angles about a hierarchical structure of 
levels, I contend in favor of the general predominance of the 
heterarchical scheme. When we leave the narrow confines of a discipline, 
or the boundaries of an experimental setting, everything comes together 
again... Given the limitations of our individual cognition, those 
vagaries in the environment are not accidental, but fundamental--and 
they percolate in our collective cognition and in our social use of the 
sciences. I agree with Joseph (I think) in the need of a more cogent 
logic for the real and not only for the formal-theoretical. Part of 
the problem is that this artificial contention of percolation has been 
treated differently in each major discipline. See for instance Peter 
Denning views on Computational Science-versus Information Science. 
Echoing McLuhan centennial, couldn't we call this problem as the 
irrenunciable mosaic structure of information percolation?

Thanking the patience,

Pedro

-- 
-
Pedro C. Marijuán
Grupo de Bioinformación / Bioinformation Group
Instituto Aragonés de Ciencias de la Salud
Avda. Gómez Laguna, 25, Pl. 11ª
50009 Zaragoza, Spain
Telf: 34 976 71 3526 ( 6818) Fax: 34 976 71 5554
pcmarijuan.i...@aragon.es
http://sites.google.com/site/pedrocmarijuan/
-

 
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[Fis] FW: Fluc replies - more

2010-09-28 Thread Kevin Kirby

All,

It is fascinating to follow the trails here from fluctuons to the it/bit
issue and beyond.

As I read Conrad's theory, a fluctuon is not a prima facie informational
object; it is not bit-like, or qubit-like for that matter.  It is as it as
any particle -- even a virtual particle, a vacuum fluctuation -- can ever
be. (Joe and I agree here.) That being said, fluctuons could still find a
home in a dual-aspect theory like that which Gordana has been developing (in
the same way as electrons, protons, etc.)

Is Conrad an idealist? A materialist? Well, in much of his work he
emphasized the special nature of matter, how it is the material substrate
that makes evolution work. It was not, pace Dennett, the dumb Darwinian
algorithm of variation + selection, but the amazingly productive degeneracy
and verticality of the organization of the physical world that made it work.

On the other hand, he also believed in what he called  the principle of
philosophic relativity (in a paper of the same name in 1997) or later, the
principle of antinomic freedom. He said that he wanted to strive for a
theory that was good in a variety of philosophical coordinate systems.
(The particular issue that motivated this position dealt with free will
versus determinism.)  Well, despite that stance, I still think he was a
materialist of a sort.

The overview by Kevin Clark on how he related Kaluza-Klein induced matter
theories to biophysics is tantalizing, and it certainly strikes one as in
the spirit of Conrad's work.  He did believe that the Ricci tensor, for
example, would be interpreted in terms of density in his masson seas, and I
suppose this could be consistent with some sort of induction down from 5D
space into ordinary spacetime.  (But this quickly goes far beyond my
expertise here.)  I do wish we could get more gravitational physicists to
tease apart Conrad's ideas -- separating what could work from what is
pleasing but a dead end.

But as Koichiro points out in his closing recollection, one need not look
only to the graviton here.

On flows across scales, this itself need not be mysterious. Take a single
photon hitting a rhodopsin molecule in the retina of a vertebrate then
[...long chain here...] triggering a fight-or-flight response. Is that a
flow across scales? Sure. Fluctuons come in to biology because life relies
on subtle conformation changes of proteins, the tactile dance of enzymes,
and quantum superposition effects play roles here, as well as fluctuations
in the vacuum seas.  This is where Conrad daringly closes the loop: in this
low-mass high-information regime of biomolecules we see a striking
similarity to the high-mass regime near black holes: the chasing of
unreachable self-consistency.

Koichiro's posting captures the metaphysical pathos of all this with these
beautiful sentences:  What is unique to the Fluctuon model is its emphasis
on the participation of persistent and itinerant disequilibrium or a
Fluctuon in implementing conservation laws internally, though there is no
room for it in the mind of the standard physicist. This perpetual
disequilibrium is all pervasive and reverberating up and down and from left
to right and back.

Now, pulling this back around to logic and Joseph Brenner. Dealing frankly
with inconsistencies is paramount here. If our formalism of level is akin to
Floridi's Levels of Abstraction, we will be missing something. (These LoAs
are formalisms that capture things about the nature of abstraction, but
capturing something in a formalism is not the same as illuminating it.)
Joe's LIR is inconsistency-friendly which suggests that this is a meeting
point with fluctuons perhaps?

(I have run long, and will defer responding to Pedro's great new post on
additional connections later.)

-- Kevin


P.S. As a side note, let me share my perplexity with the initial comment in
Steven's post. Recursion is most frequently defined so that it has a bottom,
thus ensuring finiteness, just as mathematical induction requires a base
case, and just as standard set theory has an axiom of regularity (or
foundation). Interesting things can be done with conceptually infinite
recursion (e.g. fractal geometry), or non-well-founded set theory (e.g.
Barwise's treatment of the liar paradox), but  traditional well-founded
recursion is, well, the foundation for computer science.

_
Kevin G. Kirby
Chair and Professor, Department of Computer Science
Northern Kentucky University
Highland Heights, KY 41099
ki...@nku.edu(859) 572-6544



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