[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2016-03-28 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p411721_s297210/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p411721_s297210
Log:

>> Building science/gromacs
build started at Mon Mar 28 07:14:59 UTC 2016
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-06 11.0-CURRENT FreeBSD 
11.0-CURRENT r297210 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.12
Host OSVERSION: 1100100
Jail OSVERSION: 1100104




!!! Jail is newer than host. (Jail: 1100104, Host: 1100100) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r297210
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.12
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100104
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  -L/usr/
 local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib 
-Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2016-03-10 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p410528_s296455/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p410528_s296455
Log:

>> Building science/gromacs
build started at Fri Mar 11 06:27:47 UTC 2016
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-11 11.0-CURRENT FreeBSD 
11.0-CURRENT r296455 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.12
Host OSVERSION: 1100100
Jail OSVERSION: 1100101




!!! Jail is newer than host. (Jail: 1100101, Host: 1100100) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r296455
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.12
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100101
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  -L/usr/
 local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib 
-Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2016-02-05 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p407727_s295126/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p407727_s295126
Log:

>> Building science/gromacs
build started at Fri Feb  5 18:57:07 UTC 2016
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-07 11.0-CURRENT FreeBSD 
11.0-CURRENT r295126 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.10
Host OSVERSION: 1100093
Jail OSVERSION: 1100097




!!! Jail is newer than host. (Jail: 1100097, Host: 1100093) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r295126
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100097
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin
  -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" 
LIBS=""  CXX="g++48" CXXFLAGS="-O2 -pipe -mfloat-abi=softfp 
-Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing  
-Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2016-01-22 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p406714_s293048/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p406714_s293048
Log:

>> Building science/gromacs
build started at Fri Jan 22 10:31:50 UTC 2016
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-11 11.0-CURRENT FreeBSD 
11.0-CURRENT r293048 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.10
Host OSVERSION: 1100091
Jail OSVERSION: 1100093




!!! Jail is newer than host. (Jail: 1100093, Host: 1100091) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r293048
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100093
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin
  -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" 
LIBS=""  CXX="g++48" CXXFLAGS="-O2 -pipe -mfloat-abi=softfp 
-Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing  
-Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2016-01-05 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p405059_s293048/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p405059_s293048
Log:

>> Building science/gromacs
build started at Tue Jan  5 14:28:37 UTC 2016
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-22 11.0-CURRENT FreeBSD 
11.0-CURRENT r293048 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.10
Host OSVERSION: 1100091
Jail OSVERSION: 1100093




!!! Jail is newer than host. (Jail: 1100093, Host: 1100091) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1100093
UNAME_v=FreeBSD 11.0-CURRENT r293048
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin
  -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" 
LIBS=""  CXX="g++48" CXXFLAGS="-O2 -pipe -mfloat-abi=softfp 
-Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing  
-Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""
NO_X11="@comment
"
MPICH2="@comment
"
NO_MPICH2=""
OPENMPI="@comment
"
NO_OPENMPI=""
SUFFIX_D=""
SUFFIX_MPI=""
CMAKE_BUILD_TYPE="release"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
PERL_VERSION=5.20.3

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2015-12-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p403218_s291949/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p403218_s291949
Log:

>> Building science/gromacs
build started at Fri Dec 11 10:32:55 UTC 2015
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-21 11.0-CURRENT FreeBSD 
11.0-CURRENT r291949 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.10
Host OSVERSION: 1100085
Jail OSVERSION: 1100091




!!! Jail is newer than host. (Jail: 1100091, Host: 1100085) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1100091
UNAME_v=FreeBSD 11.0-CURRENT r291949
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -
 Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""
NO_X11="@comment
"
MPICH2="@comment
"
NO_MPICH2=""
OPENMPI="@comment
"
NO_OPENMPI=""
SUFFIX_D=""
SUFFIX_MPI=""
CMAKE_BUILD_TYPE="release"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
PERL_VERSION=5.20.3
PERL_VER=5.20

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2015-10-31 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p400328_s290048/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p400328_s290048
Log:

>> Building science/gromacs
build started at Sat Oct 31 12:38:10 UTC 2015
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-05 11.0-CURRENT FreeBSD 
11.0-CURRENT r290048 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.9
Host OSVERSION: 1100079
Jail OSVERSION: 1100083




!!! Jail is newer than host. (Jail: 1100083, Host: 1100079) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1100083
UNAME_v=FreeBSD 11.0-CURRENT r290048
UNAME_r=11.0-CURRENT
LC_COLLATE=C
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=screen
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.9
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -
 Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""
NO_X11="@comment
"
MPICH2="@comment
"
NO_MPICH2=""
OPENMPI="@comment
"
NO_OPENMPI=""
SUFFIX_D=""
SUFFIX_MPI=""
CMAKE_BUILD_TYPE="release"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
PERL_VERSION=5.20.3
PERL_VER=5.20

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2015-10-24 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p399861_s289632/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p399861_s289632
Log:

>> Building science/gromacs
build started at Sat Oct 24 07:44:05 UTC 2015
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-07 11.0-CURRENT FreeBSD 
11.0-CURRENT r289632 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.9
Host OSVERSION: 1100079
Jail OSVERSION: 1100082




!!! Jail is newer than host. (Jail: 1100082, Host: 1100079) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1100082
UNAME_v=FreeBSD 11.0-CURRENT r289632
UNAME_r=11.0-CURRENT
LC_COLLATE=C
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=screen
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.9
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -
 Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""
NO_X11="@comment
"
MPICH2="@comment
"
NO_MPICH2=""
OPENMPI="@comment
"
NO_OPENMPI=""
SUFFIX_D=""
SUFFIX_MPI=""
CMAKE_BUILD_TYPE="release"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
PERL_VERSION=5.20.3
PERL_VER=5.20

[package - head-armv6-default][science/gromacs] Failed for gromacs-5.0.6 in configure

2015-09-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: free...@skysmurf.nl
Last committer: amd...@freebsd.org
Ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Log URL:
http://beefy8.nyi.freebsd.org/data/head-armv6-default/p396164_s287479/logs/gromacs-5.0.6.log
Build URL:  
http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default=p396164_s287479
Log:

>> Building science/gromacs
build started at Tue Sep  8 07:27:20 UTC 2015
port directory: /usr/ports/science/gromacs
building for: FreeBSD head-armv6-default-job-20 11.0-CURRENT FreeBSD 
11.0-CURRENT r287479 arm
maintained by: free...@skysmurf.nl
Makefile ident:  $FreeBSD: head/science/gromacs/Makefile 394419 2015-08-16 
21:31:41Z amdmi3 $
Poudriere version: 3.1.7
Host OSVERSION: 1100077
Jail OSVERSION: 1100079




!!! Jail is newer than host. (Jail: 1100079, Host: 1100077) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1100079
UNAME_v=FreeBSD 11.0-CURRENT r287479
UNAME_r=11.0-CURRENT
LC_COLLATE=C
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=screen
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=gromacs-5.0.6
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.7
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for gromacs-5.0.6:
 ATLAS=off: Use ATLAS for BLAS and LAPACK
 FLOAT=on: Use single instead of double precision
 OPENMP=on: Parallel processing support via OpenMP
 SIMD=off: Use CPU-specific optimizations
 X11=on: X11 (graphics) support
> MPI (Message Passing Interface) support: you can only select none or one 
of them
 MPICH2=off: Parallel processing support via MPICH2
 OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl PKG_CONFIG=pkgconf 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" SHELL=/bin/sh 
CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" 
FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" 
XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work  
HOME=/wrkdirs/usr/ports/science/gromacs/work TMPDIR="/tmp" NO_PIE=yes 
SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="gcc48" CFLAGS="-O2 -pipe 
-mfloat-abi=softfp  -Wl,-rpath=/usr/local/lib/gcc48 -fno-strict-aliasing"  
CPP="cpp48" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  
-L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib -
 Wl,-rpath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48" LIBS=""  CXX="g++48" 
CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -Wl,-rpath=/usr/local/lib/gcc48 
-fno-strict-aliasing  -Wl,-rpath=/usr/local/lib/gcc48"  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  
BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ATLAS="@comment
"
NO_ATLAS=""
FLOAT=""
NO_FLOAT="@comment
"
OPENMP=""
NO_OPENMP="@comment
"
SIMD="@comment
"
NO_SIMD=""
X11=""
NO_X11="@comment
"
MPICH2="@comment
"
NO_MPICH2=""
OPENMPI="@comment
"
NO_OPENMPI=""
SUFFIX_D=""
SUFFIX_MPI=""
CMAKE_BUILD_TYPE="release"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
GTK2_VERSION="2.10.0"
GTK3_VERSION="3.0.0"
PERL_VERSION=5.20.2
PERL_VER=5.20