subject:"\[package \- 111mips\-quarterly\]\[biology\/hmmer\] Failed for hmmer\-3.1b2 in package"

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/480880/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=480880
Log:

=>> Building biology/hmmer
build started at Sun Sep 30 04:52:37 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p15 FreeBSD 
11.1-RELEASE-p15 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
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QEMU_EMULATING=1
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p15
UNAME_v=FreeBSD 11.1-RELEASE-p15 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-26 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/480748/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=480748
Log:

=>> Building biology/hmmer
build started at Thu Sep 27 02:35:58 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
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MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-24 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/480610/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=480610
Log:

=>> Building biology/hmmer
build started at Tue Sep 25 01:51:04 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-21 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/480330/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=480330
Log:

=>> Building biology/hmmer
build started at Sat Sep 22 01:52:09 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-21 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 21

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-19 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/480116/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=480116
Log:

=>> Building biology/hmmer
build started at Thu Sep 20 02:12:47 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-19 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 19

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-17 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479936/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479936
Log:

=>> Building biology/hmmer
build started at Tue Sep 18 02:14:00 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-18 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 18

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-15 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479851/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479851
Log:

=>> Building biology/hmmer
build started at Sun Sep 16 02:27:56 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-06 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 06

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479616/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479616
Log:

=>> Building biology/hmmer
build started at Fri Sep 14 04:49:14 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p14 FreeBSD 
11.1-RELEASE-p14 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 12

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p14
UNAME_v=FreeBSD 11.1-RELEASE-p14 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-10 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479495/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479495
Log:

=>> Building biology/hmmer
build started at Tue Sep 11 01:53:39 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-19 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200083
Jail OSVERSION: 1101001
Job Id: 19

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
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MAIL=/var/mail/root
BLOCKSIZE=K
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UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
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LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479226/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479226
Log:

=>> Building biology/hmmer
build started at Sat Sep  8 02:57:33 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-15 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 15

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-05 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/479077/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=479077
Log:

=>> Building biology/hmmer
build started at Thu Sep  6 01:52:51 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
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--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-03 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478923/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478923
Log:

=>> Building biology/hmmer
build started at Tue Sep  4 01:52:33 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-09-01 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478725/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478725
Log:

=>> Building biology/hmmer
build started at Sun Sep  2 01:52:18 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 12

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-31 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478641/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478641
Log:

=>> Building biology/hmmer
build started at Sat Sep  1 03:15:24 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478425/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478425
Log:

=>> Building biology/hmmer
build started at Thu Aug 30 02:02:36 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-6-g819c79a1
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-6-g819c79a1
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-27 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478273/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478273
Log:

=>> Building biology/hmmer
build started at Tue Aug 28 01:52:08 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 12

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UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

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--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
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-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
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-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
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555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
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--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

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USE_PACKAGE_DEPENDS=yes
BATCH=yes
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/478091/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=478091
Log:

=>> Building biology/hmmer
build started at Sun Aug 26 02:02:34 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-08 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 08

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
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--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-24 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477988/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477988
Log:

=>> Building biology/hmmer
build started at Sat Aug 25 04:14:02 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-23 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 23

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
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USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

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--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-22 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477845/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477845
Log:

=>> Building biology/hmmer
build started at Thu Aug 23 02:20:24 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-04 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 04

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
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USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
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UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

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XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
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--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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---Begin make.conf---
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BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-20 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477697/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477697
Log:

=>> Building biology/hmmer
build started at Tue Aug 21 02:00:34 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477505/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477505
Log:

=>> Building biology/hmmer
build started at Sun Aug 19 02:14:50 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-17 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477455/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477455
Log:

=>> Building biology/hmmer
build started at Sat Aug 18 01:52:20 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477303/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477303
Log:

=>> Building biology/hmmer
build started at Fri Aug 17 04:51:56 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-11 11.1-RELEASE-p13 FreeBSD 
11.1-RELEASE-p13 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 11

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p13
UNAME_v=FreeBSD 11.1-RELEASE-p13 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/477125/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=477125
Log:

=>> Building biology/hmmer
build started at Tue Aug 14 01:53:40 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p12 FreeBSD 
11.1-RELEASE-p12 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p12
UNAME_v=FreeBSD 11.1-RELEASE-p12 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-11 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476922/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476922
Log:

=>> Building biology/hmmer
build started at Sun Aug 12 01:52:33 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-05 11.1-RELEASE-p12 FreeBSD 
11.1-RELEASE-p12 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 05

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p12
UNAME_v=FreeBSD 11.1-RELEASE-p12 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-10 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476830/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476830
Log:

=>> Building biology/hmmer
build started at Sat Aug 11 01:52:07 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-17 11.1-RELEASE-p12 FreeBSD 
11.1-RELEASE-p12 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 17

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p12
UNAME_v=FreeBSD 11.1-RELEASE-p12 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-08 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476687/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476687
Log:

=>> Building biology/hmmer
build started at Thu Aug  9 01:54:41 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-06 11.1-RELEASE-p12 FreeBSD 
11.1-RELEASE-p12 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 06

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p12
UNAME_v=FreeBSD 11.1-RELEASE-p12 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476553/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476553
Log:

=>> Building biology/hmmer
build started at Wed Aug  8 04:56:48 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p12 FreeBSD 
11.1-RELEASE-p12 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p12
UNAME_v=FreeBSD 11.1-RELEASE-p12 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-04 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476372/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476372
Log:

=>> Building biology/hmmer
build started at Sun Aug  5 01:52:36 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-07 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 07

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-03 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476327/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476327
Log:

=>> Building biology/hmmer
build started at Sat Aug  4 01:50:54 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-24 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 24

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-08-01 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/476206/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=476206
Log:

=>> Building biology/hmmer
build started at Thu Aug  2 01:51:54 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-30 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475923/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475923
Log:

=>> Building biology/hmmer
build started at Tue Jul 31 01:51:12 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-27 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475474/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475474
Log:

=>> Building biology/hmmer
build started at Sat Jul 28 03:08:16 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-10 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 10

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475338/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475338
Log:

=>> Building biology/hmmer
build started at Thu Jul 26 02:33:48 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-01 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 01

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-23 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475214/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475214
Log:

=>> Building biology/hmmer
build started at Tue Jul 24 01:56:21 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
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MAIL=/var/mail/root
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UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-21 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475055/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475055
Log:

=>> Building biology/hmmer
build started at Sun Jul 22 01:53:13 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 12

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
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--End MAKE_ENV--

--PLIST_SUB--
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EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-20 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/475045/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=475045
Log:

=>> Building biology/hmmer
build started at Sat Jul 21 02:17:31 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-13 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 13

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474918/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474918
Log:

=>> Building biology/hmmer
build started at Thu Jul 19 01:53:57 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-20 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 20

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
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BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474768/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474768
Log:

=>> Building biology/hmmer
build started at Tue Jul 17 01:52:44 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-02 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 02

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-2-g1cf194be
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474606/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474606
Log:

=>> Building biology/hmmer
build started at Sat Jul 14 01:52:01 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-04 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 04

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-11 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474466/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474466
Log:

=>> Building biology/hmmer
build started at Thu Jul 12 02:12:55 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-15 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 15

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-09 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474313/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474313
Log:

=>> Building biology/hmmer
build started at Tue Jul 10 01:59:41 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-02 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1101001
Job Id: 02

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474123/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474123
Log:

=>> Building biology/hmmer
build started at Sun Jul  8 01:53:48 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-20 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 20

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-06 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/474052/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=474052
Log:

=>> Building biology/hmmer
build started at Sat Jul  7 01:56:32 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-04 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473940/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473940
Log:

=>> Building biology/hmmer
build started at Thu Jul  5 01:53:18 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-07-03 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473787/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473787
Log:

=>> Building biology/hmmer
build started at Tue Jul  3 16:15:26 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-16 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q3/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 16

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 
-pipe -G0  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  
LDFLAGS="" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stabl

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473589/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473589
Log:

=>> Building biology/hmmer
build started at Sat Jun 30 02:07:46 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-08 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 08

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
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QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-27 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473456/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473456
Log:

=>> Building biology/hmmer
build started at Thu Jun 28 04:05:37 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-19 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 19

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473364/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473364
Log:

=>> Building biology/hmmer
build started at Tue Jun 26 02:09:58 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-23 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/473109/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=473109
Log:

=>> Building biology/hmmer
build started at Sun Jun 24 04:01:28 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-03 11.1-RELEASE-p11 FreeBSD 
11.1-RELEASE-p11 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 03

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p11
UNAME_v=FreeBSD 11.1-RELEASE-p11 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-20 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472947/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472947
Log:

=>> Building biology/hmmer
build started at Thu Jun 21 02:02:29 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472729/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472729
Log:

=>> Building biology/hmmer
build started at Tue Jun 19 02:02:06 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472577/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472577
Log:

=>> Building biology/hmmer
build started at Sun Jun 17 02:01:57 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-15 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 15

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-15 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472510/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472510
Log:

=>> Building biology/hmmer
build started at Sat Jun 16 02:09:16 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-24 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 24

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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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SAVED_TERM=
PACKAGE_BUILDING=yes
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UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
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FLAVOR=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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--SUB_LIST--
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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472351/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472351
Log:

=>> Building biology/hmmer
build started at Thu Jun 14 02:52:53 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-19 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 19

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-11 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472225/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472225
Log:

=>> Building biology/hmmer
build started at Tue Jun 12 02:06:03 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-21 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 21

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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---Begin make.conf---
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-08 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/472031/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=472031
Log:

=>> Building biology/hmmer
build started at Sat Jun  9 02:07:09 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7-1-g7087c444
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-06 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471890/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471890
Log:

=>> Building biology/hmmer
build started at Thu Jun  7 03:20:20 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-01 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 01

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/po

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-04 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471740/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471740
Log:

=>> Building biology/hmmer
build started at Tue Jun  5 02:06:15 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/po

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-02 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471390/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471390
Log:

=>> Building biology/hmmer
build started at Sun Jun  3 02:06:00 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-18 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 18

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
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EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/po

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-06-01 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471336/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471336
Log:

=>> Building biology/hmmer
build started at Sat Jun  2 02:06:04 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-07 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 07

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.7
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
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UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/po

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-30 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471189/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471189
Log:

=>> Building biology/hmmer
build started at Thu May 31 02:43:15 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-10 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 10

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
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QEMU_EMULATING=1
LOCALBASE=/usr/local
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-28 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/471072/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=471072
Log:

=>> Building biology/hmmer
build started at Tue May 29 02:06:39 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JO

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-26 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470878/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470878
Log:

=>> Building biology/hmmer
build started at Sun May 27 03:56:35 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p10 FreeBSD 
11.1-RELEASE-p10 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p10
UNAME_v=FreeBSD 11.1-RELEASE-p10 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOB

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-23 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470751/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470751
Log:

=>> Building biology/hmmer
build started at Thu May 24 02:05:47 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-10 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 10

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-21 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470590/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470590
Log:

=>> Building biology/hmmer
build started at Tue May 22 02:20:19 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-24 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 24

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
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UNAME_p=mips
SHELL=/bin/csh
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
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--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-20 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470436/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470436
Log:

=>> Building biology/hmmer
build started at Sun May 20 02:05:08 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-08 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 08

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
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CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-18 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470349/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470349
Log:

=>> Building biology/hmmer
build started at Sat May 19 02:04:23 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 12

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
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--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-16 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/470186/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=470186
Log:

=>> Building biology/hmmer
build started at Thu May 17 02:05:12 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-08 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 08

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
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QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-14 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469964/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469964
Log:

=>> Building biology/hmmer
build started at Tue May 15 02:09:40 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-06 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1101001
Job Id: 06

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-12 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469753/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469753
Log:

=>> Building biology/hmmer
build started at Sun May 13 02:07:08 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-16 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 16

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-11 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469687/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469687
Log:

=>> Building biology/hmmer
build started at Sat May 12 02:10:35 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-09 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469497/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469497
Log:

=>> Building biology/hmmer
build started at Thu May 10 02:08:19 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-18 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
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Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 18

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 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

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mz...@niid.go.jp
--End MAINTAINER--

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XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
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DISTDIR=/distfiles
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PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-07 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469347/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469347
Log:

=>> Building biology/hmmer
build started at Tue May  8 03:26:05 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-21 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 21

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_p=mips
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FLAVOR=
DEPENDS_ARGS=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

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MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
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BATCH=yes
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-05 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469160/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469160
Log:

=>> Building biology/hmmer
build started at Sun May  6 02:07:24 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-17 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 17

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
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POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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USER=root
QEMU_EMULATING=1
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HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-04 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/469045/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=469045
Log:

=>> Building biology/hmmer
build started at Sat May  5 02:07:24 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-14 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 14

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
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STATUS=1
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UNAME_p=mips
SHELL=/bin/csh
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
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--End MAKE_ENV--

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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-05-02 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468899/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468899
Log:

=>> Building biology/hmmer
build started at Thu May  3 03:33:55 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-15 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 15

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
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UNAME_p=mips
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
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CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
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MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
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--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-30 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468750/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468750
Log:

=>> Building biology/hmmer
build started at Tue May  1 02:59:58 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-20 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 20

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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USER=root
QEMU_EMULATING=1
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MAIL=/var/mail/root
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
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--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-28 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468553/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468553
Log:

=>> Building biology/hmmer
build started at Sun Apr 29 02:16:50 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-05 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 05

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
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--End MAKE_ENV--

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--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-27 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468515/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468515
Log:

=>> Building biology/hmmer
build started at Sat Apr 28 02:12:19 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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MAIL=/var/mail/root
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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---Begin Poudriere Port Flags/Env---
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-25 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468318/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468318
Log:

=>> Building biology/hmmer
build started at Thu Apr 26 02:07:01 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-01 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 01

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-3-g832b198d
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
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--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-23 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/468170/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=468170
Log:

=>> Building biology/hmmer
build started at Tue Apr 24 04:46:48 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-07 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-2-gab7278f5
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 07

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-2-gab7278f5
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QEMU_EMULATING=1
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STATUS=1
MAIL=/var/mail/root
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UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
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MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
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--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-21 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467910/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467910
Log:

=>> Building biology/hmmer
build started at Sun Apr 22 01:30:01 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-15 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 15

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
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--End MAKE_ENV--

--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-20 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467850/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467850
Log:

=>> Building biology/hmmer
build started at Sat Apr 21 02:07:34 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-17 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 17

---Begin Environment---
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MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
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FLAVOR=
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MAKE_ARGS=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-18 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467746/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467746
Log:

=>> Building biology/hmmer
build started at Thu Apr 19 02:32:51 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
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STATUS=1
MAIL=/var/mail/root
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UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-16 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467550/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467550
Log:

=>> Building biology/hmmer
build started at Tue Apr 17 02:07:23 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 12

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
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--End MAKE_ENV--

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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-14 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467335/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467335
Log:

=>> Building biology/hmmer
build started at Sun Apr 15 03:22:27 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-02 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 02

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-13 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467278/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467278
Log:

=>> Building biology/hmmer
build started at Sat Apr 14 02:06:58 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-10 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 10

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
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UNAME_p=mips
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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===> The following configuration options are available for hmmer-3.1b2:
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 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-11 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/467119/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=467119
Log:

=>> Building biology/hmmer
build started at Thu Apr 12 02:07:21 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-20 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 20

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
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STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
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UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
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CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
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--End MAKE_ENV--

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EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-09 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466932/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466932
Log:

=>> Building biology/hmmer
build started at Tue Apr 10 04:01:17 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-23 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 23

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
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--End MAKE_ENV--

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ETCDIR="etc/hmmer"
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--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
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WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
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---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-07 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466761/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466761
Log:

=>> Building biology/hmmer
build started at Sun Apr  8 03:04:10 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-22 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 22

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
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USER=root
QEMU_EMULATING=1
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
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UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-06 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466700/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466700
Log:

=>> Building biology/hmmer
build started at Sat Apr  7 02:06:52 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-12 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 12

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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
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FLAVOR=
DEPENDS_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

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XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
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PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-04 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466518/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466518
Log:

=>> Building biology/hmmer
build started at Thu Apr  5 02:06:54 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-08 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 08

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MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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SAVED_TERM=
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POUDRIERE_BUILD_TYPE=bulk
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FLAVOR=
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===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
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PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
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DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NU

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-04-03 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466278/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466278
Log:

=>> Building biology/hmmer
build started at Tue Apr  3 19:45:59 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-20 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q2/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 20

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SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
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UNAME_p=mips
SHELL=/bin/csh
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
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DISTDIR=/distfiles
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MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/M

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-31 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466107/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466107
Log:

=>> Building biology/hmmer
build started at Sun Apr  1 02:03:40 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-06 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 06

---Begin Environment---
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SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
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UNAME_p=mips
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/M

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-30 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/466007/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=466007
Log:

=>> Building biology/hmmer
build started at Sat Mar 31 02:08:49 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-23 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.6
Host OSVERSION: 1200060
Jail OSVERSION: 1101001
Job Id: 23

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.6
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/M

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-28 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/465859/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=465859
Log:

=>> Building biology/hmmer
build started at Thu Mar 29 02:15:10 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-09 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.5-34-gd10bf7fe
Host OSVERSION: 1200059
Jail OSVERSION: 1101001
Job Id: 09

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.5-34-gd10bf7fe
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-26 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/465657/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=465657
Log:

=>> Building biology/hmmer
build started at Tue Mar 27 02:08:52 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-11 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.5-29-g75f1e639
Host OSVERSION: 1200059
Jail OSVERSION: 1101001
Job Id: 11

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.5-29-g75f1e639
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-23 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/465422/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=465422
Log:

=>> Building biology/hmmer
build started at Sat Mar 24 03:02:24 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-25 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.5-29-g75f1e639
Host OSVERSION: 1200059
Jail OSVERSION: 1101001
Job Id: 25

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.5-29-g75f1e639
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_

[package - 111mips-quarterly][biology/hmmer] Failed for hmmer-3.1b2 in package

2018-03-21 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: mz...@niid.go.jp
Last committer: lini...@freebsd.org
Ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Log URL:
http://beefy14.nyi.freebsd.org/data/111mips-quarterly/465247/logs/hmmer-3.1b2.log
Build URL:  
http://beefy14.nyi.freebsd.org/build.html?mastername=111mips-quarterly&build=465247
Log:

=>> Building biology/hmmer
build started at Thu Mar 22 02:10:59 UTC 2018
port directory: /usr/ports/biology/hmmer
package name: hmmer-3.1b2
building for: FreeBSD 111mips-quarterly-job-11 11.1-RELEASE-p6 FreeBSD 
11.1-RELEASE-p6 1101001 mips
maintained by: mz...@niid.go.jp
Makefile ident:  $FreeBSD: branches/2018Q1/biology/hmmer/Makefile 456588 
2017-12-18 04:28:28Z linimon $
Poudriere version: 3.2.5-28-g7cd09e2e
Host OSVERSION: 1200059
Jail OSVERSION: 1101001
Job Id: 11

---Begin Environment---
POUDRIEREPATH=/usr/local/bin/poudriere
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p
SCRIPTPREFIX=/usr/local/share/poudriere
MASTERNAME=111mips-quarterly
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/111mips-quarterly/ref/.p/pool
SAVED_TERM=
PACKAGE_BUILDING=yes
POUDRIERE_BUILD_TYPE=bulk
MASTERMNT=/usr/local/poudriere/data/.m/111mips-quarterly/ref
POUDRIERE_VERSION=3.2.5-28-g7cd09e2e
LIBEXECPREFIX=/usr/local/libexec/poudriere
USER=root
QEMU_EMULATING=1
LOCALBASE=/usr/local
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
HOME=/root
STATUS=1
MAIL=/var/mail/root
BLOCKSIZE=K
UNAME_r=11.1-RELEASE-p6
UNAME_v=FreeBSD 11.1-RELEASE-p6 1101001
OSVERSION=1101001
ABI_FILE=/usr/lib/crt1.o
UNAME_m=mips
UNAME_p=mips
SHELL=/bin/csh
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for hmmer-3.1b2:
 DOCS=on: Build and/or install documentation
 EXAMPLES=on: Build and/or install examples
 TEST=off: Build and/or run tests
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
mz...@niid.go.jp
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hmmer/work  
HOME=/wrkdirs/usr/ports/biology/hmmer/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/hmmer/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  
CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -G0  -fno-strict-aliasing"  
CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  
CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -G0 -fno-strict-aliasing "  
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  
BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  
BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=11.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local PORTDOCS="" 
PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/hmmer"  
EXAMPLESDIR="share/examples/hmmer"  DATADIR="share/hmmer"  WWWDIR="www/hmmer"  
ETCDIR="etc/hmmer"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/hmmer 
DOCSDIR=/usr/local/share/doc/hmmer EXAMPLESDIR=/usr/local/share/examples/hmmer  
WWWDIR=/usr/local/www/hmmer ETCDIR=/usr/local/etc/hmmer
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=mips
MACHINE_ARCH=mips
ARCH=${MACHINE_ARCH}
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_

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