subject:"\[package \- 121amd64\-quarterly\]\[biology\/ncbi\-cxx\-toolkit\] Failed for ncbi\-cxx\-toolkit\-21.0.0

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-30 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/550754/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=550754
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Oct  1 01:37:03 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-11 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 11

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-28 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/550180/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=550180
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Sep 29 03:28:53 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/550049/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=550049
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Sep 26 01:27:46 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-23 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/549855/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=549855
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Sep 24 01:34:06 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-21 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/549545/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=549545
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Sep 22 02:56:54 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/548805/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=548805
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Sep 20 10:08:06 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p10 FreeBSD 
12.1-RELEASE-p10 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p10
UNAME_r=12.1-RELEASE-p10
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-too

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-14 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/548632/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=548632
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Sep 15 01:26:19 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-10 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 10

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-13 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/548425/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=548425
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Sep 13 05:19:09 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-14 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 14

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-12 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/548275/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=548275
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Sep 12 09:34:54 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/548073/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=548073
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Fri Sep 11 10:04:08 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/547914/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=547914
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Sep  8 05:29:41 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-08 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 08

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-09-06 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/547398/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=547398
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Sep  6 09:50:58 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p9 FreeBSD 
12.1-RELEASE-p9 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p9
UNAME_r=12.1-RELEASE-p9
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-31 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/546964/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=546964
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Mon Aug 31 22:45:46 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-28 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/546312/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=546312
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Aug 29 01:21:24 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-24 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/546123/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=546123
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Aug 25 01:50:58 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-23 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/545618/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=545618
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Aug 23 23:21:36 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-19 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/545210/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=545210
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Aug 19 19:14:50 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-11 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 11

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-15 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/545069/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=545069
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Aug 16 01:37:40 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-10 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 10

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-14 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/544884/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=544884
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Aug 15 01:32:38 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-12 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/544756/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=544756
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Aug 13 01:31:18 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-08 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 08

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-10 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/544602/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=544602
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Aug 11 01:59:50 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-09 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/544222/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=544222
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Aug  9 09:14:16 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p8 FreeBSD 
12.1-RELEASE-p8 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p8
UNAME_r=12.1-RELEASE-p8
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-03 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/544121/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=544121
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Aug  4 01:38:08 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-14 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 14

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-03 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/543913/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=543913
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Mon Aug  3 18:42:11 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-08-01 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/543874/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=543874
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Aug  1 13:12:54 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-29 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/543537/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=543537
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Jul 29 19:17:52 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/543394/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=543394
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jul 26 02:41:09 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-24 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542897/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542897
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Fri Jul 24 07:36:25 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542674/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542674
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Jul 21 01:36:06 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-05 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 05

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-18 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542506/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542506
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jul 19 02:31:21 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-17 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542455/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542455
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Jul 18 01:52:44 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-15 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542303/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542303
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Jul 16 01:54:19 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-15 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/542152/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=542152
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Jul 15 09:28:41 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-08 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 08

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-12 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/541729/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=541729
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jul 12 07:34:31 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p7 FreeBSD 
12.1-RELEASE-p7 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p7
UNAME_r=12.1-RELEASE-p7
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-06 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/541156/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=541156
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Jul  7 03:31:40 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q3/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-01 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/540953/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=540953
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Jul  2 01:32:52 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-07-01 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/540842/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=540842
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Jul  1 15:01:28 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-27 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/540657/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=540657
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jun 28 01:29:50 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-07 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 07

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-26 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/540450/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=540450
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Jun 27 01:38:01 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/540348/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=540348
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Jun 25 21:32:03 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-05 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 05

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-22 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/539952/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=539952
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Jun 23 01:17:51 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-07 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 07

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/539752/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=539752
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jun 21 01:49:46 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-11 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 11

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/539614/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=539614
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Jun 20 13:15:27 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300094
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-17 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/539307/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=539307
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Jun 17 18:27:31 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-13 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/538418/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=538418
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jun 14 00:11:48 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/538270/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=538270
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Jun  9 01:47:45 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-07 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/538017/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=538017
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Jun  7 09:37:20 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-05 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/537863/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=537863
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Fri Jun  5 14:36:49 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.3  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-06-01 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/537513/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=537513
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Jun  2 02:56:17 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-31 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/537028/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=537028
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun May 31 14:51:51 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-07 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 07

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-27 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/536702/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=536702
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu May 28 01:35:44 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/536540/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=536540
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue May 26 01:29:44 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-23 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/536318/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=536318
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun May 24 01:20:12 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-22 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/536257/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=536257
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat May 23 01:20:22 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-21 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/536000/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=536000
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu May 21 14:45:00 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/535794/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=535794
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed May 20 10:16:43 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-14 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 14

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-16 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/535194/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=535194
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat May 16 23:58:02 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/534932/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=534932
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue May 12 01:43:29 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-06 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 06

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/534802/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=534802
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Mon May 11 14:17:48 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/534414/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=534414
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat May  9 01:44:28 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-06 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/534156/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=534156
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu May  7 01:32:18 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-11 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 11

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-06 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/534001/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=534001
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed May  6 14:47:03 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-03 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 03

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-02 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/533719/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=533719
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun May  3 01:34:42 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-05-01 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/533598/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=533598
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat May  2 03:44:45 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-30 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/533404/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=533404
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Apr 30 05:10:46 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-27 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/533224/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=533224
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Apr 28 01:33:53 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/532608/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=532608
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Apr 25 23:55:11 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-20 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/532243/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=532243
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Apr 21 02:17:02 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-07 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 07

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-18 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/532056/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=532056
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Apr 19 01:35:55 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-18 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531988/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531988
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Apr 18 18:46:58 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-15 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531803/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531803
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Apr 16 01:58:25 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-11 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 11

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-13 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531651/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531651
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Apr 14 01:48:06 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531434/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531434
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Apr 12 01:44:15 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-05 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 05

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-10 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531391/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531391
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Apr 11 01:51:45 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-10 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/531165/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=531165
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Fri Apr 10 14:55:48 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-12 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/530939/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=530939
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Apr  8 11:19:52 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-04-04 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/530234/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=530234
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Apr  4 20:15:25 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q2/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.2  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-30 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/529935/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=529935
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Tue Mar 31 02:23:42 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-27 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/529300/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=529300
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Mar 28 01:37:36 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-05 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 05

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-25 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/529160/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=529160
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Mar 26 02:17:08 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-02 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-23 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528733/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528733
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Mon Mar 23 18:46:56 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-01 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 01

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-18 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528680/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528680
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Mar 19 01:32:48 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-16 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 16

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-14 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528398/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528398
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Mar 15 01:29:20 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-04 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 04

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-13 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528395/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528395
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sat Mar 14 01:39:47 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528259/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528259
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Mar 12 01:33:53 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-13 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-11 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/528140/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=528140
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Wed Mar 11 11:09:38 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-08 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/527970/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=527970
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Sun Mar  8 19:17:27 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-09 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

[package - 121amd64-quarterly][biology/ncbi-cxx-toolkit] Failed for ncbi-cxx-toolkit-21.0.0_2 in build

2020-03-05 Thread pkg-fallout

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: y...@freebsd.org
Last committer: zeis...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 
516742 2019-11-04 21:08:20Z zeising $
Log URL:
http://beefy2.nyi.freebsd.org/data/121amd64-quarterly/527662/logs/ncbi-cxx-toolkit-21.0.0_2.log
Build URL:  
http://beefy2.nyi.freebsd.org/build.html?mastername=121amd64-quarterly&build=527662
Log:

=>> Building biology/ncbi-cxx-toolkit
build started at Thu Mar  5 15:58:12 UTC 2020
port directory: /usr/ports/biology/ncbi-cxx-toolkit
package name: ncbi-cxx-toolkit-21.0.0_2
building for: FreeBSD 121amd64-quarterly-job-10 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 amd64
maintained by: y...@freebsd.org
Makefile ident:  $FreeBSD: 
branches/2020Q1/biology/ncbi-cxx-toolkit/Makefile 516742 2019-11-04 21:08:20Z 
zeising $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 10

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121amd64-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121amd64-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121amd64-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
y...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--without-debug --with-dll --without-static --x-libraries=/usr/local/lib 
--x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 OPENSSLBASE=/usr OPENSSLDIR=/etc/ssl 
OPENSSLINC=/usr/include OPENSSLLIB=/usr/lib 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-cxx-toolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  
LDFLAGS="  -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PYTHON2="@comment " 
PYTHON3="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local 
LIB32DIR=lib PERL_VERSION=5.30.1  PERL_VER=5.30  
PERL5_MAN1=lib/perl5/site_perl/man/man1  
PERL5_MAN3=lib/perl5/site_perl/man/man3  SITE_PERL=lib/perl5/site_perl  
SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/ncbi-cxx-toolkit"  
EXAMPLESDIR="share/examples/ncbi-cxx-toolkit"  DATADIR="share/ncbi-cxx-toolkit" 
 WWWDIR="www/ncbi-cxx-toolkit"  ETCDIR="etc/ncbi-cxx-toolkit"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  
DATADIR=/usr/local/share/ncbi-cxx-toolkit 
DOCSDIR=/usr/local/share/doc/ncbi-cxx-toolkit 
EXAMPLESDIR=/usr/local/share/examples/ncbi-cxx-toolkit  
WWWDIR=/usr/local/www/ncbi-cxx-toolkit ETCDIR=/usr/local/etc/ncbi-cxx-toolkit

88 matches

Mail list logo