subject:"\[package \- 121armv6\-quarterly\]\[biology\/ncbi\-blast\+\] Failed for ncbi\-blast\+\-2.10.0 in build"

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-07-03 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/540953/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=540953
Log:

=>> Building biology/ncbi-blast+
build started at Fri Jul  3 10:07:45 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-14 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 14

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UNAME_m=arm
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UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
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HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

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---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-07-01 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/540450/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=540450
Log:

=>> Building biology/ncbi-blast+
build started at Wed Jul  1 10:54:39 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-15 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 15

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6 1201000
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
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USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
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PACKAGE_BUILDING=yes
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/539752/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=539752
Log:

=>> Building biology/ncbi-blast+
build started at Thu Jun 25 07:15:11 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-01 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 01

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UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p6 1201000
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
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POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-19 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/539407/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=539407
Log:

=>> Building biology/ncbi-blast+
build started at Fri Jun 19 17:10:32 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-09 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

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UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
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UNAME_v=FreeBSD 12.1-RELEASE-p6 1201000
UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
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OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-17 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/538709/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=538709
Log:

=>> Building biology/ncbi-blast+
build started at Wed Jun 17 11:45:25 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-10 12.1-RELEASE-p6 FreeBSD 
12.1-RELEASE-p6 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 10

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UNAME_r=12.1-RELEASE-p6
BLOCKSIZE=K
MAIL=/var/mail/root
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HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
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XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
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CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
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CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/538270/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=538270
Log:

=>> Building biology/ncbi-blast+
build started at Sat Jun 13 06:46:09 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-11 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 11

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UNAME_p=armv6
UNAME_m=arm
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UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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USER=root
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POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
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PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-08 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/538137/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=538137
Log:

=>> Building biology/ncbi-blast+
build started at Mon Jun  8 09:24:24 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-03 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 03

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UNAME_p=armv6
UNAME_m=arm
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UNAME_v=FreeBSD 12.1-RELEASE-p5 1201000
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
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POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
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P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
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OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-05 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/537863/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=537863
Log:

=>> Building biology/ncbi-blast+
build started at Fri Jun  5 23:00:05 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-14 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 14

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UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p5 1201000
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
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j...@freebsd.org
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--End CONFIGURE_ARGS--

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--End CONFIGURE_ENV--

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PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-06-02 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/537513/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=537513
Log:

=>> Building biology/ncbi-blast+
build started at Tue Jun  2 12:05:04 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-06 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 06

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BLOCKSIZE=K
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MAKE_ARGS=
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

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--MAKE_ENV--
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BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-31 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/537028/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=537028
Log:

=>> Building biology/ncbi-blast+
build started at Sun May 31 10:12:21 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-15 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 15

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UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
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GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
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CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
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LDFLAGS=" -fstack-protector-strong -W
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CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-28 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/536702/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=536702
Log:

=>> Building biology/ncbi-blast+
build started at Thu May 28 12:20:29 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-07 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 07

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UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PORT_FLAGS=
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FLAVOR=
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MAKE_ARGS=
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
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AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
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HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
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LDFLAGS=" -fstack-protector-strong -W
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 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-26 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/536540/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=536540
Log:

=>> Building biology/ncbi-blast+
build started at Tue May 26 14:32:10 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-09 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

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UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

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---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
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--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/536000/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=536000
Log:

=>> Building biology/ncbi-blast+
build started at Mon May 25 16:44:30 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-07 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 07

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UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
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XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
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RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-19 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/535342/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=535342
Log:

=>> Building biology/ncbi-blast+
build started at Tue May 19 13:30:13 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-16 12.1-RELEASE-p5 FreeBSD 
12.1-RELEASE-p5 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 16

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UNAME_p=armv6
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UNAME_v=FreeBSD 12.1-RELEASE-p5 1201000
UNAME_r=12.1-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
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POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
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PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
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SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-14 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/534802/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=534802
Log:

=>> Building biology/ncbi-blast+
build started at Fri May 15 01:26:52 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-03 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 03

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UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
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UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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QEMU_EMULATING=1
USER=root
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PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
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POUDRIEREPATH=/usr/local/bin/poudriere
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-09 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/534414/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=534414
Log:

=>> Building biology/ncbi-blast+
build started at Sat May  9 12:22:50 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-01 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 01

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UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
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HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PACKAGE_BUILDING=yes
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
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SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-08 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/534156/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=534156
Log:

=>> Building biology/ncbi-blast+
build started at Fri May  8 10:05:00 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-09 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 09

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SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
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UNAME_v=FreeBSD 12.1-RELEASE-p4 1201000
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
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RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-05-06 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/533598/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=533598
Log:

=>> Building biology/ncbi-blast+
build started at Wed May  6 09:20:52 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-07 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1201000
Job Id: 07

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SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4 1201000
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
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POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
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POUDRIEREPATH=/usr/local/bin/poudriere
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/532608/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=532608
Log:

=>> Building biology/ncbi-blast+
build started at Thu Apr 30 02:19:01 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-17 12.1-RELEASE-p4 FreeBSD 
12.1-RELEASE-p4 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 17

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p4 1201000
UNAME_r=12.1-RELEASE-p4
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-21 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/532243/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=532243
Log:

=>> Building biology/ncbi-blast+
build started at Tue Apr 21 14:55:39 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-13 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 13

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BLOCKSIZE=K
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MAKE_ARGS=
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

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BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/531988/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=531988
Log:

=>> Building biology/ncbi-blast+
build started at Sat Apr 18 16:57:00 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-16 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 16

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
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MAKE_ARGS=
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---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
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PYTHON="/usr/local/bin/python3.7" 
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PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
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CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
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LDFLAGS=" -fstack-protector-strong -W
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CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/531434/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=531434
Log:

=>> Building biology/ncbi-blast+
build started at Thu Apr 16 06:36:37 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-12 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
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---Begin OPTIONS List---
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
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AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
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HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
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SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
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LDFLAGS=" -fstack-protector-strong -W
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-10 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/531165/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=531165
Log:

=>> Building biology/ncbi-blast+
build started at Fri Apr 10 21:27:39 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-13 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 13

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
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PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
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--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
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CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-04-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/530234/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=530234
Log:

=>> Building biology/ncbi-blast+
build started at Tue Apr  7 17:17:26 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-08 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q2/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 08

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
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HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
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--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
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SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
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-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-03-31 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/529935/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=529935
Log:

=>> Building biology/ncbi-blast+
build started at Tue Mar 31 13:53:12 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-06 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 06

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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SAVED_TERM=
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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
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PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-03-30 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/529160/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=529160
Log:

=>> Building biology/ncbi-blast+
build started at Mon Mar 30 08:26:23 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-16 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 16

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UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PACKAGE_BUILDING=yes
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MASTERNAME=121armv6-quarterly
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-03-24 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/528733/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=528733
Log:

=>> Building biology/ncbi-blast+
build started at Tue Mar 24 11:38:08 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-13 12.1-RELEASE-p3 FreeBSD 
12.1-RELEASE-p3 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p3 1201000
UNAME_r=12.1-RELEASE-p3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-03-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/528395/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=528395
Log:

=>> Building biology/ncbi-blast+
build started at Wed Mar 18 20:23:40 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-12 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2 1201000
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

2020-03-11 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: j...@freebsd.org
Last committer: j...@freebsd.org
Ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 520932 
2019-12-26 16:21:17Z jwb $
Log URL:
http://beefy15.nyi.freebsd.org/data/121armv6-quarterly/527794/logs/ncbi-blast+-2.10.0.log
Build URL:  
http://beefy15.nyi.freebsd.org/build.html?mastername=121armv6-quarterly&build=527794
Log:

=>> Building biology/ncbi-blast+
build started at Thu Mar 12 02:39:53 UTC 2020
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.10.0
building for: FreeBSD 121armv6-quarterly-job-12 12.1-RELEASE-p2 FreeBSD 
12.1-RELEASE-p2 1201000 arm
maintained by: j...@freebsd.org
Makefile ident:  $FreeBSD: branches/2020Q1/biology/ncbi-blast+/Makefile 
520932 2019-12-26 16:21:17Z jwb $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300076
Jail OSVERSION: 1201000
Job Id: 12

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p2 1201000
UNAME_r=12.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-5-gc81843e5
MASTERMNT=/usr/local/poudriere/data/.m/121armv6-quarterly/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=121armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/121armv6-quarterly/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
j...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--
AR="ar cr" --without-boost --libdir=/usr/local/lib/ncbi-tools++ 
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl 
ac_cv_path_PERL_PATH=/usr/local/bin/perl  PERL_USE_UNSAFE_INC=1 
PYTHON="/usr/local/bin/python3.7" 
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" 
AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" 
CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work 
 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work  
HOME=/wrkdirs/usr/ports/biology/ncbi-blast+/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/ncbi-blast+/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" 
AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" 
GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" 
OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" 
RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" 
SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  
LOCALBASE=/usr/local  CC="gcc9" CFLAGS="-O2 -pipe  -fstack-protector-strong 
-Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing "  CPP="cpp9" CPPFLAGS=""  
LDFLAGS=" -fstack-protector-strong -W
 l,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS=""  CXX="g++9" 
CXXFLAGS="-O2 -pipe  -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9  
-Wl,-rpath=/usr/local/lib/gcc9 "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.7m  PYTHON_LIBDIR=lib/python3.7  
PYTHON_PLATFORM=freebsd12  PYTHON_SITELIBDIR=lib/python3.7/site-packages  
PYTHON_SUFFIX=37  PYTHON_VER=3.7  PYTHON_VERSION=python3.7 PY

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

[package - 121armv6-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.10.0 in build

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