subject:"\[package \- head\-amd64\-default\]\[biology\/primer3\] Failed for primer3\-2.3.6 in build"

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p477986_s338306/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p477986_s338306
Log:

=>> Building biology/primer3
build started at Sun Aug 26 04:50:17 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-18 12.0-ALPHA3 FreeBSD 12.0-ALPHA3 
1200082 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200082
Job Id: 18




!!! Jail is newer than host. (Jail: 1200082, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200082
UNAME_v=FreeBSD 12.0-ALPHA3 1200082
UNAME_r=12.0-ALPHA3
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-21 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p477696_s338122/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p477696_s338122
Log:

=>> Building biology/primer3
build started at Wed Aug 22 05:17:37 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-18 12.0-ALPHA2 FreeBSD 12.0-ALPHA2 
1200079 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200079
Job Id: 18




!!! Jail is newer than host. (Jail: 1200079, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200079
UNAME_v=FreeBSD 12.0-ALPHA2 1200079
UNAME_r=12.0-ALPHA2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p477468_s337991/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p477468_s337991
Log:

=>> Building biology/primer3
build started at Sun Aug 19 04:56:36 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-ALPHA2 FreeBSD 12.0-ALPHA2 
1200078 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200078
Job Id: 09




!!! Jail is newer than host. (Jail: 1200078, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200078
UNAME_v=FreeBSD 12.0-ALPHA2 1200078
UNAME_r=12.0-ALPHA2
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p477302_s337732/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p477302_s337732
Log:

=>> Building biology/primer3
build started at Thu Aug 16 10:46:10 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-ALPHA1 FreeBSD 12.0-ALPHA1 
1200077 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200077
Job Id: 03




!!! Jail is newer than host. (Jail: 1200077, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200077
UNAME_v=FreeBSD 12.0-ALPHA1 1200077
UNAME_r=12.0-ALPHA1
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-14 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p477123_s337732/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p477123_s337732
Log:

=>> Building biology/primer3
build started at Tue Aug 14 15:46:25 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-17 12.0-ALPHA1 FreeBSD 12.0-ALPHA1 
1200077 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200077
Job Id: 17




!!! Jail is newer than host. (Jail: 1200077, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200077
UNAME_v=FreeBSD 12.0-ALPHA1 1200077
UNAME_r=12.0-ALPHA1
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-11 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p476857_s337595/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p476857_s337595
Log:

=>> Building biology/primer3
build started at Sun Aug 12 04:47:54 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-13 12.0-ALPHA1 FreeBSD 12.0-ALPHA1 
1200077 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200077
Job Id: 13




!!! Jail is newer than host. (Jail: 1200077, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200077
UNAME_v=FreeBSD 12.0-ALPHA1 1200077
UNAME_r=12.0-ALPHA1
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 3

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-09 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p476715_s337509/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p476715_s337509
Log:

=>> Building biology/primer3
build started at Thu Aug  9 10:52:42 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-05 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200076 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200076
Job Id: 05




!!! Jail is newer than host. (Jail: 1200076, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200076
UNAME_v=FreeBSD 12.0-CURRENT 1200076
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-06 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p476556_s337401/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p476556_s337401
Log:

=>> Building biology/primer3
build started at Tue Aug  7 01:54:48 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-16 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200076 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200076
Job Id: 16




!!! Jail is newer than host. (Jail: 1200076, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200076
UNAME_v=FreeBSD 12.0-CURRENT 1200076
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-08-04 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p476329_s336959/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p476329_s336959
Log:

=>> Building biology/primer3
build started at Sat Aug  4 14:40:36 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-19 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200076 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200076
Job Id: 19




!!! Jail is newer than host. (Jail: 1200076, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200076
UNAME_v=FreeBSD 12.0-CURRENT 1200076
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-31 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p475964_s336959/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p475964_s336959
Log:

=>> Building biology/primer3
build started at Wed Aug  1 05:00:13 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-02 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200076 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200076
Job Id: 02




!!! Jail is newer than host. (Jail: 1200076, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200076
UNAME_v=FreeBSD 12.0-CURRENT 1200076
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-28 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p475478_s336801/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p475478_s336801
Log:

=>> Building biology/primer3
build started at Sat Jul 28 08:21:48 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-13 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200075 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200075
Job Id: 13




!!! Jail is newer than host. (Jail: 1200075, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200075
UNAME_v=FreeBSD 12.0-CURRENT 1200075
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-25 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p475340_s336728/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p475340_s336728
Log:

=>> Building biology/primer3
build started at Thu Jul 26 01:58:52 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-04 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200075 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200075
Job Id: 04




!!! Jail is newer than host. (Jail: 1200075, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200075
UNAME_v=FreeBSD 12.0-CURRENT 1200075
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-24 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p475217_s336659/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p475217_s336659
Log:

=>> Building biology/primer3
build started at Tue Jul 24 15:10:50 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-05 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200075 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200075
Job Id: 05




!!! Jail is newer than host. (Jail: 1200075, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200075
UNAME_v=FreeBSD 12.0-CURRENT 1200075
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-21 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p475044_s336572/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p475044_s336572
Log:

=>> Building biology/primer3
build started at Sun Jul 22 04:12:35 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-16 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200075 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200075
Job Id: 16




!!! Jail is newer than host. (Jail: 1200075, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200075
UNAME_v=FreeBSD 12.0-CURRENT 1200075
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-17 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474767_s336359/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474767_s336359
Log:

=>> Building biology/primer3
build started at Wed Jul 18 03:50:10 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200073 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-2-g1cf194be
Host OSVERSION: 1200069
Jail OSVERSION: 1200073
Job Id: 21




!!! Jail is newer than host. (Jail: 1200073, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200073
UNAME_v=FreeBSD 12.0-CURRENT 1200073
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-2-g1cf194be
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-14 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474653_s336301/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474653_s336301
Log:

=>> Building biology/primer3
build started at Sun Jul 15 01:19:22 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200072 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1200072
Job Id: 15




!!! Jail is newer than host. (Jail: 1200072, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200072
UNAME_v=FreeBSD 12.0-CURRENT 1200072
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-13 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474611_s336270/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474611_s336270
Log:

=>> Building biology/primer3
build started at Sat Jul 14 01:51:17 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-11 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200072 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1200072
Job Id: 11




!!! Jail is newer than host. (Jail: 1200072, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200072
UNAME_v=FreeBSD 12.0-CURRENT 1200072
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-12 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474481_s336216/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474481_s336216
Log:

=>> Building biology/primer3
build started at Thu Jul 12 13:15:46 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-17 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200072 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1200072
Job Id: 17




!!! Jail is newer than host. (Jail: 1200072, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200072
UNAME_v=FreeBSD 12.0-CURRENT 1200072
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-09 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474314_s336154/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474314_s336154
Log:

=>> Building biology/primer3
build started at Tue Jul 10 02:12:48 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-17 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200072 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200069
Jail OSVERSION: 1200072
Job Id: 17




!!! Jail is newer than host. (Jail: 1200072, Host: 1200069) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200072
UNAME_v=FreeBSD 12.0-CURRENT 1200072
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p474051_s336054/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p474051_s336054
Log:

=>> Building biology/primer3
build started at Sun Jul  8 03:58:01 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-07 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200072 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200072
Job Id: 07




!!! Jail is newer than host. (Jail: 1200072, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200072
UNAME_v=FreeBSD 12.0-CURRENT 1200072
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-07-03 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473790_s335878/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473790_s335878
Log:

=>> Building biology/primer3
build started at Tue Jul  3 13:49:12 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-06 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200070 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200070
Job Id: 06




!!! Jail is newer than host. (Jail: 1200070, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200070
UNAME_v=FreeBSD 12.0-CURRENT 1200070
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=   true
.endif
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/fin

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473592_s335809/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473592_s335809
Log:

=>> Building biology/primer3
build started at Sat Jun 30 01:46:03 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 15




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_601/final 335540) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-27 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473483_s335753/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473483_s335753
Log:

=>> Building biology/primer3
build started at Thu Jun 28 03:57:23 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-02 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 02




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-26 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473363_s335650/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473363_s335650
Log:

=>> Building biology/primer3
build started at Tue Jun 26 15:03:19 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-06 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 06




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-23 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473169_s335594/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473169_s335594
Log:

=>> Building biology/primer3
build started at Sun Jun 24 01:20:00 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-18 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 18




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-22 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p473110_s335573/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p473110_s335573
Log:

=>> Building biology/primer3
build started at Sat Jun 23 02:11:04 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 09




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-20 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p472945_s335462/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p472945_s335462
Log:

=>> Building biology/primer3
build started at Thu Jun 21 01:28:57 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 14




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-18 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p472730_s335353/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p472730_s335353
Log:

=>> Building biology/primer3
build started at Tue Jun 19 01:43:06 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 20




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-16 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p472509_s335244/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p472509_s335244
Log:

=>> Building biology/primer3
build started at Sun Jun 17 03:51:24 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200069 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200069
Job Id: 21




!!! Jail is newer than host. (Jail: 1200069, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200069
UNAME_v=FreeBSD 12.0-CURRENT 1200069
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-12 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p472224_s334983/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p472224_s334983
Log:

=>> Building biology/primer3
build started at Wed Jun 13 03:19:16 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200067 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200067
Job Id: 14




!!! Jail is newer than host. (Jail: 1200067, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200067
UNAME_v=FreeBSD 12.0-CURRENT 1200067
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-09 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p472032_s334863/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p472032_s334863
Log:

=>> Building biology/primer3
build started at Sat Jun  9 15:08:13 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-18 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200066 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7-1-g7087c444
Host OSVERSION: 1200062
Jail OSVERSION: 1200066
Job Id: 18




!!! Jail is newer than host. (Jail: 1200066, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200066
UNAME_v=FreeBSD 12.0-CURRENT 1200066
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7-1-g7087c444
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-07 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p471894_s334748/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p471894_s334748
Log:

=>> Building biology/primer3
build started at Thu Jun  7 15:08:16 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200066 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1200066
Job Id: 08




!!! Jail is newer than host. (Jail: 1200066, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200066
UNAME_v=FreeBSD 12.0-CURRENT 1200066
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-04 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p471739_s334645/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p471739_s334645
Log:

=>> Building biology/primer3
build started at Tue Jun  5 01:44:58 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-10 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200066 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1200066
Job Id: 10




!!! Jail is newer than host. (Jail: 1200066, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200066
UNAME_v=FreeBSD 12.0-CURRENT 1200066
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-06-02 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p471337_s334511/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p471337_s334511
Log:

=>> Building biology/primer3
build started at Sat Jun  2 13:04:12 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-19 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200066 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.7
Host OSVERSION: 1200062
Jail OSVERSION: 1200066
Job Id: 19




!!! Jail is newer than host. (Jail: 1200066, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200066
UNAME_v=FreeBSD 12.0-CURRENT 1200066
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.7
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-29 Thread pkg-fallout



You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p471071_s334305/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p471071_s334305
Log:

=>> Building biology/primer3
build started at Wed May 30 03:38:47 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-06 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200065 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200065
Job Id: 06




!!! Jail is newer than host. (Jail: 1200065, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200065
UNAME_v=FreeBSD 12.0-CURRENT 1200065
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_60

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-26 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p470877_s334231/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p470877_s334231
Log:

=>> Building biology/primer3
build started at Sun May 27 04:04:11 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-06 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200064 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200064
Job Id: 06




!!! Jail is newer than host. (Jail: 1200064, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200064
UNAME_v=FreeBSD 12.0-CURRENT 1200064
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-23 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p470749_s333820/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p470749_s333820
Log:

=>> Building biology/primer3
build started at Thu May 24 01:26:23 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200063
Job Id: 15




!!! Jail is newer than host. (Jail: 1200063, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-22 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p470591_s333820/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p470591_s333820
Log:

=>> Building biology/primer3
build started at Tue May 22 14:17:39 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-05 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200063
Job Id: 05




!!! Jail is newer than host. (Jail: 1200063, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-19 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p470350_s333820/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p470350_s333820
Log:

=>> Building biology/primer3
build started at Sat May 19 14:05:53 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200063
Job Id: 14




!!! Jail is newer than host. (Jail: 1200063, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-16 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p470187_s333696/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p470187_s333696
Log:

=>> Building biology/primer3
build started at Thu May 17 02:42:46 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200063
Job Id: 20




!!! Jail is newer than host. (Jail: 1200063, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-15 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p469985_s333618/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p469985_s333618
Log:

=>> Building biology/primer3
build started at Tue May 15 11:26:05 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200062
Jail OSVERSION: 1200063
Job Id: 20




!!! Jail is newer than host. (Jail: 1200063, Host: 1200062) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  
-fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS=" 
-fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector 
-fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s 
-m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 
555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-12 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p469699_s333508/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p469699_s333508
Log:

=>> Building biology/primer3
build started at Sun May 13 01:59:02 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-12 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200063 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200063
Job Id: 12




!!! Jail is newer than host. (Jail: 1200063, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200063
UNAME_v=FreeBSD 12.0-CURRENT 1200063
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-10 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p469496_s333442/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p469496_s333442
Log:

=>> Building biology/primer3
build started at Thu May 10 14:37:54 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-02 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 02




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-08 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p469346_s44/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p469346_s44
Log:

=>> Building biology/primer3
build started at Tue May  8 16:35:49 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-04 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 04




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-05 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p469081_s333267/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p469081_s333267
Log:

=>> Building biology/primer3
build started at Sat May  5 14:43:46 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 03




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-03 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468901_s333189/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468901_s333189
Log:

=>> Building biology/primer3
build started at Thu May  3 13:06:35 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-04 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 04




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-05-01 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468751_s333133/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468751_s333133
Log:

=>> Building biology/primer3
build started at Tue May  1 10:00:32 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 21




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-29 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468602_s333087/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468602_s333087
Log:

=>> Building biology/primer3
build started at Sun Apr 29 19:05:33 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 03




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-27 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468512_s333079/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468512_s333079
Log:

=>> Building biology/primer3
build started at Sat Apr 28 03:49:27 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-13 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 13




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-25 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468319_s333013/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468319_s333013
Log:

=>> Building biology/primer3
build started at Thu Apr 26 01:39:58 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-10 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-3-g832b198d
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 10




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-3-g832b198d
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-24 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p468169_s332898/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p468169_s332898
Log:

=>> Building biology/primer3
build started at Tue Apr 24 08:20:36 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-2-gab7278f5
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 03




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-2-gab7278f5
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-20 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p467853_s332849/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p467853_s332849
Log:

=>> Building biology/primer3
build started at Sat Apr 21 01:28:12 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-13 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 13




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-19 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p467743_s332742/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p467743_s332742
Log:

=>> Building biology/primer3
build started at Thu Apr 19 12:58:57 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-04 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 04




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-16 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p467547_s332632/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p467547_s332632
Log:

=>> Building biology/primer3
build started at Tue Apr 17 01:29:27 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 08




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-14 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p467281_s332490/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p467281_s332490
Log:

=>> Building biology/primer3
build started at Sun Apr 15 01:20:35 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200062 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200062
Job Id: 08




!!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200062
UNAME_v=FreeBSD 12.0-CURRENT 1200062
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-11 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p467121_s332419/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p467121_s332419
Log:

=>> Building biology/primer3
build started at Thu Apr 12 02:38:54 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-16 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200061 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200061
Job Id: 16




!!! Jail is newer than host. (Jail: 1200061, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200061
UNAME_v=FreeBSD 12.0-CURRENT 1200061
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-10 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p466934_s332344/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p466934_s332344
Log:

=>> Building biology/primer3
build started at Tue Apr 10 15:15:36 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200061 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200061
Job Id: 14




!!! Jail is newer than host. (Jail: 1200061, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200061
UNAME_v=FreeBSD 12.0-CURRENT 1200061
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-07 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p466702_s332158/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p466702_s332158
Log:

=>> Building biology/primer3
build started at Sun Apr  8 01:03:45 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200061 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200061
Job Id: 20




!!! Jail is newer than host. (Jail: 1200061, Host: 1200060) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200061
UNAME_v=FreeBSD 12.0-CURRENT 1200061
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
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WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-05 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p466519_s332055/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p466519_s332055
Log:

=>> Building biology/primer3
build started at Thu Apr  5 14:12:11 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-07 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6-1-ga0ae87a0
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 07

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6-1-ga0ae87a0
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker"

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-04-03 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p466276_s331900/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p466276_s331900
Log:

=>> Building biology/primer3
build started at Tue Apr  3 15:33:14 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 21

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
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WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
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EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" 
"/libexec/ld-elf.so.1"

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-31 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p466017_s331831/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p466017_s331831
Log:

=>> Building biology/primer3
build started at Sat Mar 31 18:03:56 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-16 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.6
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 16

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.6
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
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WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
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EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" 
"/libexec/ld-elf.so.1"

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-28 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p465858_s331718/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p465858_s331718
Log:

=>> Building biology/primer3
build started at Thu Mar 29 06:48:19 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-34-gd10bf7fe
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 09

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-34-gd10bf7fe
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linke

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-26 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p465656_s331602/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p465656_s331602
Log:

=>> Building biology/primer3
build started at Tue Mar 27 02:53:45 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-13 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-29-g75f1e639
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 13

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-29-g75f1e639
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PACKAGE_BUILDING=yes
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---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
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--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
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 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linke

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-24 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p465419_s331470/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p465419_s331470
Log:

=>> Building biology/primer3
build started at Sat Mar 24 10:08:49 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-29-g75f1e639
Host OSVERSION: 1200060
Jail OSVERSION: 1200060
Job Id: 08

---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-29-g75f1e639
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
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OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
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---End Environment---

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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
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BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
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BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
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WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
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DOCSDIR=/usr/local/share/doc/primer3 
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--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
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PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
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PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 
326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: 
posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linke

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-21 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p465253_s331339/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p465253_s331339
Log:

=>> Building biology/primer3
build started at Thu Mar 22 02:07:23 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-05 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-28-g7cd09e2e
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 05




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-28-g7cd09e2e
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

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PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
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PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
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BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
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WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
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ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-19 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p465050_s331230/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p465050_s331230
Log:

=>> Building biology/primer3
build started at Tue Mar 20 02:13:40 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-24-gdf5c0606
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 20




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-24-gdf5c0606
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-18 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p464852_s331113/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p464852_s331113
Log:

=>> Building biology/primer3
build started at Sun Mar 18 06:00:15 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-24-gdf5c0606
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 21




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-24-gdf5c0606
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-16 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p464744_s331078/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p464744_s331078
Log:

=>> Building biology/primer3
build started at Sat Mar 17 04:00:14 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-24-gdf5c0606
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 09




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-24-gdf5c0606
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-15 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p464545_s330962/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p464545_s330962
Log:

=>> Building biology/primer3
build started at Thu Mar 15 09:58:38 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-17-gfa2920cc
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 09




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-17-gfa2920cc
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-13 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p464333_s330823/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p464333_s330823
Log:

=>> Building biology/primer3
build started at Tue Mar 13 14:42:14 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-3-gef344f26
Host OSVERSION: 1200059
Jail OSVERSION: 1200060
Job Id: 08




!!! Jail is newer than host. (Jail: 1200060, Host: 1200059) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-3-gef344f26
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-10 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p464039_s330715/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p464039_s330715
Log:

=>> Building biology/primer3
build started at Sat Mar 10 13:46:58 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.5-2-gf06fe9cf
Host OSVERSION: 1200054
Jail OSVERSION: 1200060
Job Id: 03




!!! Jail is newer than host. (Jail: 1200060, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.5-2-gf06fe9cf
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-06 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p463680_s330525/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p463680_s330525
Log:

=>> Building biology/primer3
build started at Wed Mar  7 00:54:18 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200060 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-67-gb1dd83c4
Host OSVERSION: 1200054
Jail OSVERSION: 1200060
Job Id: 21




!!! Jail is newer than host. (Jail: 1200060, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200060
UNAME_v=FreeBSD 12.0-CURRENT 1200060
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-67-gb1dd83c4
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-03-03 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p463457_s330300/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p463457_s330300
Log:

=>> Building biology/primer3
build started at Sun Mar  4 01:40:42 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-01 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200059 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200059
Job Id: 01




!!! Jail is newer than host. (Jail: 1200059, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200059
UNAME_v=FreeBSD 12.0-CURRENT 1200059
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (branches/release_60 325932) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-28 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p463273_s330136/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p463273_s330136
Log:

=>> Building biology/primer3
build started at Thu Mar  1 04:05:24 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 14




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (branches/release_60 325932) 
(based on LLVM 6.0.0) Target: x86_64-unknown-freebsd12.0 Thread model: posix 
InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-27 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p463103_s330045/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p463103_s330045
Log:

=>> Building biology/primer3
build started at Tue Feb 27 13:33:52 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-08 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 08




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-25 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p462888_s329943/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p462888_s329943
Log:

=>> Building biology/primer3
build started at Sun Feb 25 02:18:58 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-10 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 10




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-24 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p462764_s329886/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p462764_s329886
Log:

=>> Building biology/primer3
build started at Sat Feb 24 04:08:03 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-11 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 11




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-21 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p462554_s329777/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p462554_s329777
Log:

=>> Building biology/primer3
build started at Thu Feb 22 03:08:57 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-10 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 10




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-20 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p462364_s329612/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p462364_s329612
Log:

=>> Building biology/primer3
build started at Tue Feb 20 12:18:35 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 21




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-17 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p462077_s329422/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p462077_s329422
Log:

=>> Building biology/primer3
build started at Sat Feb 17 12:44:18 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-21 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-56-g0fd5b0e3
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 21




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-56-g0fd5b0e3
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-13 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p461678_s329188/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p461678_s329188
Log:

=>> Building biology/primer3
build started at Wed Feb 14 00:38:59 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-02 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200058 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-53-g8afae7cc
Host OSVERSION: 1200054
Jail OSVERSION: 1200058
Job Id: 02




!!! Jail is newer than host. (Jail: 1200058, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200058
UNAME_v=FreeBSD 12.0-CURRENT 1200058
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.4-53-g8afae7cc
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200058
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-10 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p461354_s329096/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p461354_s329096
Log:

=>> Building biology/primer3
build started at Sun Feb 11 00:47:34 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-06 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200057 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-49-g17610211
Host OSVERSION: 1200054
Jail OSVERSION: 1200057
Job Id: 06




!!! Jail is newer than host. (Jail: 1200057, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200057
UNAME_v=FreeBSD 12.0-CURRENT 1200057
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.2.4-49-g17610211
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200057
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-08 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p461193_s329007/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p461193_s329007
Log:

=>> Building biology/primer3
build started at Thu Feb  8 15:29:10 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-17 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-48-gf881e389
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 17




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.2.4-48-gf881e389
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-06 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p461032_s328914/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p461032_s328914
Log:

=>> Building biology/primer3
build started at Tue Feb  6 13:47:41 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-20 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-42-g98f2e28b
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 20




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.2.4-42-g98f2e28b
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-03 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p460860_s328835/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p460860_s328835
Log:

=>> Building biology/primer3
build started at Sun Feb  4 02:08:33 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-37-g8639d323
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 15




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.2.4-37-g8639d323
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-02 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p460764_s328823/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p460764_s328823
Log:

=>> Building biology/primer3
build started at Sat Feb  3 05:12:42 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-05 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-34-g673bd441
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 05




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.2.4-34-g673bd441
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-02-01 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p460549_s328647/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p460549_s328647
Log:

=>> Building biology/primer3
build started at Thu Feb  1 10:20:25 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-27-gd8c1b2b1
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 15




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4-27-gd8c1b2b1
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.co

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-30 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p460361_s328567/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p460361_s328567
Log:

=>> Building biology/primer3
build started at Tue Jan 30 14:08:11 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-15 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-22-g5aece630
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 15




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4-22-g5aece630
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.co

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-27 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p460069_s328457/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p460069_s328457
Log:

=>> Building biology/primer3
build started at Sat Jan 27 16:18:42 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-20-g3ab5fc55
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 14




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4-20-g3ab5fc55
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LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
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BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.co

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-25 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459899_s328383/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459899_s328383
Log:

=>> Building biology/primer3
build started at Thu Jan 25 11:09:18 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-14 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4-3-g97a70595
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 14




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4-3-g97a70595
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-23 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459797_s328300/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459797_s328300
Log:

=>> Building biology/primer3
build started at Tue Jan 23 22:31:31 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-09 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 09




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-22 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459717_s328266/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459717_s328266
Log:

=>> Building biology/primer3
build started at Tue Jan 23 02:54:02 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-04 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 04




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-20 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459491_s328183/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459491_s328183
Log:

=>> Building biology/primer3
build started at Sat Jan 20 11:18:32 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-03 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 03




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-17 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459306_s328104/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459306_s328104
Log:

=>> Building biology/primer3
build started at Thu Jan 18 03:37:42 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-16 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.4
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 16




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.4
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-15 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p459147_s328035/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p459147_s328035
Log:

=>> Building biology/primer3
build started at Tue Jan 16 02:24:22 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-12 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.3-46-g2b218269
Host OSVERSION: 1200054
Jail OSVERSION: 1200056
Job Id: 12




!!! Jail is newer than host. (Jail: 1200056, Host: 1200054) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.3-46-g2b218269
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

[package - head-amd64-default][biology/primer3] Failed for primer3-2.3.6 in build

2018-01-14 Thread pkg-fallout


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer: po...@freebsd.org
Last committer: t...@freebsd.org
Ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Log URL:
http://beefy12.nyi.freebsd.org/data/head-amd64-default/p458948_s327953/logs/primer3-2.3.6.log
Build URL:  
http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p458948_s327953
Log:

=>> Building biology/primer3
build started at Sun Jan 14 20:18:47 UTC 2018
port directory: /usr/ports/biology/primer3
package name: primer3-2.3.6
building for: FreeBSD head-amd64-default-job-19 12.0-CURRENT FreeBSD 
12.0-CURRENT 1200056 amd64
maintained by: po...@freebsd.org
Makefile ident:  $FreeBSD: head/biology/primer3/Makefile 354670 2014-05-20 
19:32:39Z tijl $
Poudriere version: 3.2.3-46-g2b218269
Host OSVERSION: 1200052
Jail OSVERSION: 1200056
Job Id: 19




!!! Jail is newer than host. (Jail: 1200056, Host: 1200052) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1200056
UNAME_v=FreeBSD 12.0-CURRENT 1200056
UNAME_r=12.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
P_PYTHON_MAJOR_VER=2
POUDRIERE_VERSION=3.2.3-46-g2b218269
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
po...@freebsd.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/primer3/work  
XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/primer3/work  
HOME=/wrkdirs/usr/ports/biology/primer3/work TMPDIR="/tmp" 
PATH=/wrkdirs/usr/ports/biology/primer3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
 NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES 
PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 
-pipe  -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  
LDFLAGS=" -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe 
-fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" 
BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644" 
 BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  
BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local  
RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/primer3"  
EXAMPLESDIR="share/examples/primer3"  DATADIR="share/primer3"  
WWWDIR="www/primer3"  ETCDIR="etc/primer3"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/primer3 
DOCSDIR=/usr/local/share/doc/primer3 
EXAMPLESDIR=/usr/local/share/examples/primer3  WWWDIR=/usr/local/www/primer3 
ETCDIR=/usr/local/etc/primer3
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
 /usr/local/etc/poudriere.d/make.conf 
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
 /usr/ports/Mk/Scripts/ports_env.sh 
ARCH=amd64
CONFIGURE_MAX_CMD_LEN=262144
HAVE_COMPAT_IA32_KERN=YES
OPSYS=FreeBSD
OSREL=12.0
OSVERSION=1200056
PYTHONBASE=/usr/local
UID=0
_OSRELEASE=12.0-CURRENT
 Misc Poudriere 
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limi

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