[Freesurfer] Register Nifti files on Siemens raw data

Hi, I have siemens mrs data which are exportet as raw data at the scanner. I haven't still a possibility to convert it to dicom. But the header entries looks similar to dicom. It contains Size entries and normal vectors: SliceThickness: 25.00 PositionVector[0]:

Re: [Freesurfer] mri_ca_register error

Hi Alan, if you can ftp one of the subjects to us I'll take a look. Bruce On Sat, 16 Feb 2008, Alan Anticevic wrote: Hi, I was hoping someone can help me with this issue. We are running the recon-all command on a bunch of subjects and most of them (16/21) process just fine (no errors

Re: [Freesurfer] mri_surf2surf

Hi Doug, Thanks. I tried this and got the following: [EMAIL PROTECTED] test2bem]$ mri_surf2surf --srcsubject $SUBJECT --sval-xyz smhead.surf --sval /imaging/dw01/simulation/subjects/p002/surf/ --trgsubject ico --trgicoorder 7 --tval /imaging/dw01/simulation/subjects/p002/surf/p002_outer_skin