Dear colleagues--Please share widely, we are looking to hire
immediately. Thanks!
The S.E.L.F Regulation Laboratory (http://self-regulationlab.fiu.edu/;
PI Dr. Paulo Graziano, PhD) in collaboration with the Developmental
Cognitive Neuroscience Laboratory (http://dcn.fiu.edu; PI Dr. Anthony
Hi Doug- I did try
mris_convert -o $SUBJECTS_DIR/FSsub/surf/lh.white
$SUBJECTS_DIR/sub/REST/bold/001/fmcpr.odd.sm5.fsaverage.lh.nii.gz
fmcpr.lh.gifit-file.gii
I still get freadFloat: frear failed error.
Cheers,
Sabin Khadka
On Tue, Sep 13, 2016 at 2:53 PM, Douglas N Greve
No, the surface is not valid in those regions as they are not cortex
On 09/12/2016 07:18 PM, Nosal, Eryka [PSY] wrote:
>
> Hi,
>
> I’m very new to Freesurfer, and I am trying to get subject-specific
> masks from the output of recon all that I can use on my functional
> data. I was going to
what is your mris_convert command line? You need to include vertex
position information (eg, -o lh.white)
On 09/12/2016 03:32 PM, Sabin Khadka wrote:
> Hi all,
>
> Is there a way to convert FSFAST files
> (fmcpr.odd.sm5.fsaverage.?h.nii.gz) files to convert into gifti
> format? I've tried
Did you run out of disk space? The recon could have been aborted during
the middle of the write (but unlikely). If the edits were in the
brainmask, then there is not much you can do. If the edits were not in
the brainmask, you can just rerun starting at the brainmask and the
edits will be
Can you send the full terminal output?
On 09/13/2016 01:26 PM, Claudia Dacquino wrote:
> Hi freesurfers,
> I'm trying to create an average subject for GLM analysis from my
> group, using
>
> make_average_subject --out newtemplate
>
> and I got this error:
>
> Reading surface
>
Hello, FS experts,
I am trying to use QA tool:
I ran the following command
recon_checker -snaps-only -s-file subjects.txt
The script output the following:
X11 connection rejected because of wrong authentication.
GLUT: Fatal Error in tkmedit.bin: could not open display: localhost:12.0
Hi all,
After doing some manual edits to the wm and pial masks, I recently had a
recon fail with the following error:
mghRead(/subject_177/mri/brainmask.mgz, -1): read error
Invalid argument
mri_em_register: could not open mask volume brainmask.mgz.
When trying to load either the
Hi freesurfers,
I'm trying to create an average subject for GLM analysis from my group,
using
make_average_subject --out newtemplate
and I got this error:
Reading surface
/media/TREKSTOR/SUBJ/newtemplate/surf/lh.white
No such file or directory
ERROR: could not read
Hi freesurfers,
I'm trying to create an average subject for GLM analysis from my group,
using
make_average_subject --out newtemplate
and I got this error:
Reading surface
/media/TREKSTOR/SUBJ/newtemplate/surf/lh.white
No such file or directory
ERROR: could not read
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