Re: [Freesurfer] Learning dti processing tutorial

2019-10-13 Thread Greve, Douglas N.,Ph.D.
What is the input file that you are supplying? Often this happens when the input it a multi-echo MPRAGE. If so, you can run mri_concat multi-echo-mprage.mgz --rms --o mprage.mgz then use mprage.mgz as the input to recon-all On 10/12/2019 4:48 PM, Renew Andrade wrote: > External Email -

Re: [Freesurfer] Freesurfer Digest, Vol 188, Issue 21

2019-10-13 Thread Juan Rivas
tp://dx.doi.org/10.1016/j.neuroimage.2010.07.020 > > http://reuter.mit.edu/papers/reuter-robreg10.pdf > > > > Reading contexts of file > /usr/local/freesurfer/dev/average/HippoSF/atlas/compressionLoo