I think it should be ok in principle, though it might fail because the v6 long
stream expects there to be certain files with certain names, and they might not
be there with 5.1.
On 12/16/2019 2:49 PM, Morgan Botdorf wrote:
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Dear Freesurfer Experts,
We have
Hi Marina
yes, mri_vol2surf will sample volumes onto the surface. You will need to
register them first (we typically use Doug Greve's bbregister for this).
What preprocessing did you do? For cortical data we don't recommend
smoothing in the volume - you are much better off sampling to the surf
Yes, use mri_vol2surf. Make sure to use --projfrac 0.5 to sample in the middle
of cortex. Run it with --help to get examples.
On 12/17/2019 11:16 AM, Marina Fernández wrote:
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Dear experts,
I’ve done the fMRI preprocessing and now I would like to convert each f
OK, I'm still at a loss. The one suspicious thing is that it only took a few
min to run. So you have never looked at that volume? What is in the atlas?
On 12/16/2019 3:42 PM, Boris Rauchmann wrote:
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This is the log when I´m creating this file:
Boriss-MacBook
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Dear experts,
I’ve done the fMRI preprocessing and now I would like to convert each file
(that contains 250 volumes) to surface.
Is it correct to use the function mri_vol2surf? Should I use any specific
flag because they are 4D files? What is the best
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Dear all,
We are looking for three doctoral students to join our Experimental Psychology
and Cognitive Neuroscience group in Graz to work on fMRI of visual illusions.
You will find the official job ad below
(Please note that doctoral students in Aus
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Hi experts,
We are doing the segmentation of the subfields of the hippocampal and
amygdala subfields, brainstem subestructures and thalamic nuclei. When we
used segmentHA_T1.sh and segmentThalamicNuclei.sh, 'Command not found'
appears.
On the other ha
