[Freesurfer] postdoc at Martinos/LCN

A postdoctoral fellow position in the Lab for Computational Neuroimaging (LCN) under Dr. Douglas Greve is available. We are seeking a highly motivated and talented researcher to pursue independent research.  The role will be to develop new algorithms within FreeSurfer, including multi-modal,

[Freesurfer] Visualizing and interpreting vertex-wise GLM analysis

External Email - Use Caution Dear Freesurfers, I have a simple design with patients and controls and would like to find regions showing group differences in cortical volume and thickness. I also remove the effect of age, sex and ICV. Running the GLM group analysis by the book I

[Freesurfer] VM image passcode

External Email - Use Caution Hi, what is the pass code needed to expand the Ubuntu archive? Thanks! Sean ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The

[Freesurfer] FreeSurfer Password

External Email - Use Caution Good morning, I need the password to expand the archive for Freesurfer 7.2.0 release in Ubuntu. Thanks, Mattia ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

[Freesurfer] selxavg3-sess out of memory error

External Email - Use Caution Hi! I am running large single subject GLMs with selxavg3-sess and I run into a Matlab "out of memory" error. I was wondering whether you had any advice on how to get around that. I have 40-50 runs per subject, and the analyses are whole brain. The GLM

Re: [Freesurfer] Problem with longitudinal processing

External Email - Use Caution Hi, thanks for your answer. Yes I did the longitudinal runs using the base as described in the manual. So the pipeline is: 1.) Cross sectional Recon all 2.) recon-all -base Template.nii -tp timepoint1.nii -tp timepoint2.nii -tp timepoint3.nii -all