[Freesurfer] Using the Desterieux Cortical Atlas to Extract PET SUVs

Good afternoon all, I was hoping to get some advice on how to approach this. Any and all feedback is much appreciated. My group has been using FSL’s Feat to run analyses for our PET-MR project. Part of what we need to do next is create masks using fslmaths that overlay the significant

Re: [Freesurfer] mri_glmfit-sim error

External Email - Use Caution I see now this is an issue addressed stable 7.2.0 version of FreeSurfer:

[Freesurfer] mri_glmfit-sim error

External Email - Use Caution Hello FreeSurfer developers and experts, I am trying to do cluster correction with mri_glmfit-sim after running mri_glmfit. The command I ran:   mri_glmfit-sim --glmdir lh.volume.SCNStudyTest.10.glmdir --cache 3.0 abs --cwp 0.05 --2spaces

Re: [Freesurfer] mri_synthsr with CT images

Dear Gonzalo, It normally mean “you ran out of memory”. Does cropping the input image a bit more tightly around the brain solve the problem? (you can easily use Freeview->tools for this) Cheers, /E -- Juan Eugenio Iglesias http://www.jeiglesias.com From: Gonzalo Rojas Costa Date: Friday,