[Freesurfer] transfer the Parcellation to MNI

2013-12-29 Thread
Dear all, I want to extract the ROI defined by Desikan-Killiany Atlas and save it as a mask on the MNI space. I try to extract the vertex coordinates by the freesurfer_read_surf and transfer them to MNI. But which surface should I use? And maybe some better method. Thank you for the freesurfer,

[Freesurfer] lh.curv VS lh.inflated.h

2013-07-15 Thread
Dear Sir, I have found two files in the surf folder.One is 'lh.curv',the other is 'lh.inflated.h'.I have found some one said that the 'lh.curv' can be used to quantify the curvature. but int the wiki, the command 'mris_curvature' can ouput the file 'lh.inflated.h' which is MeanCurvature. So I w