Re: [Freesurfer] mirroring fsaverage labels between hemispheres

2018-04-04 Thread Abigail Noyce
here rh.sphere lh.sphere.left_right > rh.sphere.left_right > > should take less than an hour to run > > On 04/03/2018 03:28 PM, Abigail Noyce wrote: > > > > Date: Mon, 2 Apr 2018 14:55:47 -0400 > > From: Douglas Greve <dgr...@mgh.harvard.edu

Re: [Freesurfer] Freesurfer Digest, Vol 170, Issue 1

2018-04-03 Thread Abigail Noyce
> Date: Mon, 2 Apr 2018 14:55:47 -0400 > From: Douglas Greve > Subject: Re: [Freesurfer] mirroring fsaverage labels between > hemispheres > > If you have a label defined on the lh or rh of fsaverage, you can map it > to the contralateral hemi with something like >

[Freesurfer] mirroring fsaverage labels between hemispheres

2018-03-29 Thread Abigail Noyce
Hi, I have pored over (I think) all of the mailing list postings about cross-hemisphere mapping and I can't quite figure out how to do this. I have a bunch of labels on fsaverage, and I want to be able to check/visualize the relationship between lh and rh versions of the labels. I can do

[Freesurfer] (no subject)

2016-12-12 Thread Abigail Noyce
Hi Doug et al, I would like to get a different cluster summary stat out of mri_glmfit-sim. Rather than size, I'd like to use the "sum of t-scores" (after Maris & Oostenwald 2007, for example). That is, set a cluster inclusion threshold, and then for each cluster of adjacent vertices that clear

[Freesurfer] working with cluster annotations in fs-fast

2016-05-31 Thread Abigail Noyce
I haven't yet considered?) Thanks! Abby Noyce -- Abigail Noyce, Ph.D. Department of Psychological & Brain Sciences Boston University ano...@bu.edu ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/ma