Re: [Freesurfer] Having Matlab portion run as compiled matlab

2011-07-19 Thread B.T. Thomas Yeo
Hi Bill, you want to look at mcc (http://www.mathworks.com/help/toolbox/compiler/mcc.html ) Usually what works for me is something like: mcc -m -v matlab_file.m This will generate a console executable matlab_file --Thomas On Jul 19, 2011, at 3:02 PM, Bill Taylor wrote: So I peaked in

Re: [Freesurfer] tksurfer tcl scripting: Environment variables for hemisphere and subject

2010-05-21 Thread B.T. Thomas Yeo
There's a tksurfer scripting reference here: http://surfer.nmr.mgh.harvard.edu/fswiki/TkSurferGuide/TkSurferScripting/TkSurferScriptingReference --Thomas On May 21, 2010, at 9:39 AM, Bruce Fischl wrote: probably, but I don't know what it is. You can look in tksurfer.tcl to see if you can

Re: [Freesurfer] How to get deformation maps in surface-based registrations

2010-05-18 Thread B.T. Thomas Yeo
I don't have it either. Regards, Thomas On May 18, 2010, at 4:51 PM, Bruce Fischl wrote: I don't think we have anything to create the deformation field explicitly, unless Thomas Yeo (ccd) does. cheers Bruce On Tue, 18 May 2010, Xiaojing Long wrote: Hi, Bruce, Thanks a lot for