Re: [Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-26 Thread Daniel Cole
. N. On Mon, 2013-02-25 at 17:07 -0500, Daniel Cole wrote: Hi Zeke, Thank you for the advice. I have Mac OS X Version 10.7.5. I checked to see if XQuartz is installed and it is. I reinstalled it to be sure but I'm still running into the same problems. Do you (or does anyone else

Re: [Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-25 Thread Daniel Cole
popping up and without any errors. Thanks! Daniel -- Daniel Cole University of Rochester Brain and Cognitive Sciences dcol...@u.rochester.edu ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https

[Freesurfer] Tkregister2 / Tksurfer / Tkmedit Won't Open

2013-02-21 Thread Daniel Cole
let it sit at this stage for multiple hours without anything popping up and without any errors. Thanks! Daniel -- Daniel Cole University of Rochester Brain and Cognitive Sciences dcol...@u.rochester.edu ___ Freesurfer mailing list Freesurfer

[Freesurfer] mc-sess Error

2013-02-11 Thread Daniel Cole
= fast_svbslice(mri.vol,fstem,[],outbext,bmri); Any ideas or suggestions would be greatly appreciated! -- Daniel Cole University of Rochester Brain and Cognitive Sciences dcol...@u.rochester.edu ___ Freesurfer mailing list Freesurfer

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
Hello again, Don't mean to be a bother. I was wondering if anyone had any thoughts on what possibly be going wrong during my retinotopic analysis that I posted. I'm at quite a loss and would appreciate a look. Thanks and best, Daniel On Fri, May 11, 2012 at 11:49 AM, Daniel Cole dcol

Re: [Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-16 Thread Daniel Cole
the color wheel overlay to work. When I select it the surface of the brain goes black and the segmentation lines are the only things remaining. Is the color wheel display not working a known issue by any chance? Thanks so much, Daniel On Wed, May 16, 2012 at 9:21 AM, Daniel Cole dcol

[Freesurfer] FsFastIndividual Retinotopy - Polar Only

2012-05-11 Thread Daniel Cole
using *tksurfer-sess -a rtopy.self.?h -s sessid -map angle*? In fact the angle file is not created. Thanks so much for your time and help. Daniel * * -- Daniel Cole University of Rochester Brain and Cognitive Sciences dcol...@u.rochester.edu