: freesurfer@nmr.mgh.harvard.edu
Oggetto: Re: [Freesurfer] FreeSurfer Dev Releases
On 11/07/2016 05:39 AM, Elia S. wrote:
> Dear FreeSurfer Developers,
>
>
> We have been trying out, for the past few months, the freesurfer dev
> releases, and in particular this one:
>
>
> freesurfer-X8
Dear FreeSurfer Developers,
We have been trying out, for the past few months, the freesurfer dev releases,
and in particular this one:
freesurfer-X86_64-unknown-linux-gnu-dev5-20150924
My question is, does the above version classify as a nightly version of
FreeSurfer 5, or as an early beta
Dear Freesurfer Community,
Running Tracula preprocessing produces this error:
ERROR: Could not open
/home/elia/scripts/Tracula/LCL/dcmTimePoints_tar/T13D/timePoint1/dmri/bvals for
reading
I think the error described is the same as here:
command line,
do you get any errors?
a.y
On Thu, 12 Jun 2014, Elia S. wrote:
Dear Freesurfer community,
Whenever i try to launch the tracula preprocessing, using set dob0 = 1
and the following command
line:
trac-all -prep -no-isrunning -c
'/home/elia/scripts/Tracula/LCL/Tracula-B0
: Re: [Freesurfer] Tracula preprocessing error ( set dob0 = 1 )
Hi Elia - This could very well be the case. Does the epidewarp.fsl command
give you any specific error message, or does it just not create an output?
a.y
On Tue, 17 Jun 2014, Elia S. wrote:
Hi Anastasia,
Yes, launching the same
message about epidewarp.fsl from
Doug, there is a newer version that works with FSL 5.
On Tue, 17 Jun 2014, Elia S. wrote:
Hi Anastasia,
The epidewarp.fsl gives me the following output:
FSLVersion 5.0.6
FSLVerMaj 5
FSL Version is 5.0.6, must be 3.X or 4.X
Either from script or command
Dear Freesurfer community,
Whenever i try to launch the tracula preprocessing, using set dob0 = 1 and
the following command line:
trac-all -prep -no-isrunning -c
'/home/elia/scripts/Tracula/LCL/Tracula-B0-Input_zip/tracula.config
It stops, giving me errors like these:
niiRead(): error opening
Dear Freesurfer Staff,
I encountered the following error while running tracula - longitudinal:
ERROR: flag ; unrecognized
The exact command line i ran is the following one:
trac-all -prep -c
'/home/elia/scripts/Tracula/LCL/dcmTimePoints_tar-2/tracula.config'
I will attach the complete
://surfer.nmr.mgh.harvard.edu/fswiki/Tracula/#Updates
FYI, there will be another tracula update soon (after ISMRM) that will
further improve the longitudinal stream specifically.
a.y
On Fri, 9 May 2014, Elia S. wrote:
Dear Freesurfer Staff,
I encountered the following error while running tracula
