bits ?
2015-06-29 18:15 GMT+07:00 Jalmar Teeuw :
Sorry, I didn't have access to my CentOS machine, the 32-bit libraries use the
suffix i686 instead of i386, so try
sudo yum remove libXp.i686
By removing the 32-bit version you essential ensure only the 64-bit version is
available when
mmand returns with
No Packages marked for removal
This is my output for:'file $FREESURFER_HOME/bin/3dvolreg.afni'
/usr/local/freesurfer/bin/3dvolreg.afni: ELF 64-bit LSB executable, x86-64, version 1 (GNU/Linux), statically linked, stripped
2015-06-26 16:19 GMT+07:00 Jalmar Teeuw :
Ha
l the same.
> 3dvolreg.afni: error while loading shared libraries: libXp.so.6: wrong ELF
> class: ELFCLASS32
> output of uname -a on my system is:
> Linux localhost.localdomain 2.6.32-358.el6.x86_64 #1 SMP Fri Feb 22 00:31:26
> UTC 2013 x86_64 x86_64 x86_64 GNU/Linux
>
> 2015
x86_64 to set the new path for
> shared library.
> Ps: Is there any differences between libXpm.x86_64 and libXp.x86_64
>
> 2015-06-24 16:03 GMT+07:00 Jalmar Teeuw :
>> That sounds more like you have only the 32-bit version of the libXp
>> installed when 64-bit is required. Ar
That sounds more like you have only the 32-bit version of the libXp installed
when 64-bit is required. Are you using the 64-bit version of Freesurfer 5.3.0
for CentOS 6 that is available on the downloads page?
Have you tried
sudo yum install libXp.x86_64
on the terminal? This should install
ett wrote:
Hi,
On Thu, Jun 11, 2015 at 2:09 AM, Jalmar Teeuw wrote:
Hi Matthew,
Thanks for getting back at this. We only process data for our users, so I don't
have permission to share a sample with you. But I'll ask around to see if I can
get a scan for you.
To be honest, we aren
Hi Matthew,
Thanks for getting back at this. We only process data for our users, so I don't
have permission to share a sample with you. But I'll ask around to see if I can
get a scan for you.
To be honest, we aren't quite sure if the problem is with nibabel (v1.3.0). I
tried to reproduce the p
or what it
> should contain.
>
> I appreciate this information.
>
> Best,
> Jennifer
>
>
>
> -Original Message-
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Jalmar Teeuw
> Sent: We
Hi Jennifer,
We had the same problem with importing scans into Freesurfer that had been
converted from PAR/REC to NIFTI using nipy. The problem only affected a subset
of the data. When visualising the data with Fiji the brain appeared highly
skewed. Upon closer inspection of the header data of
