Re: [Freesurfer] are there any previous studies on the robustness of freesurfer default parameters as used in cortical thickness computation?

2013-11-15 Thread Mark Alexiuk
analysis for freesurfer? Is the test suite publicly available? Thank you very much. Mark -Original Message- From: Bruce Fischl [mailto:fis...@nmr.mgh.harvard.edu] Sent: November-15-13 8:14 AM To: Mark Alexiuk Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] are there any previous

[Freesurfer] are there any previous studies on the robustness of freesurfer default parameters as used in cortical thickness computation?

2013-11-14 Thread Mark Alexiuk
Hi, My interest is in cortical thickness measurements for longitudinal Alzheimer data, namely the ADNI dataset. My understanding is that recon-all can be used to generate cortical thicknesses. I am trying to understand how the default parameter values used in recon-all were arrived at. Are