[Freesurfer] Doctoral Position in Brain Microstructure Imaging Analysis using MRI and light sheet microscopy

2019-12-04 Thread Matteo Bastiani
Applications are invited for an MRC fully funded 3.5 year PhD studentship at the University of Nottingham – UK, under the primary supervision of Dr Matteo Bastiani. The successful candidate will engage in specialist training with ex vivo and in vivo (subject to the experience and wishes

[Freesurfer] mris_fill on HCP data

2015-07-08 Thread Matteo Bastiani
Hi all, I have been trying to use the mris_fill function on some Human connectome project data. I firstly convert the .gii file containing the pial surface using mris_convert. When visualising the converted mesh into FreeView everything looks normal. After the first step (“mris_fill -c -r 1”),

Re: [Freesurfer] mris_fill on HCP data

2015-07-08 Thread Matteo Bastiani
Nope. On 8 Jul 2015, at 17:06, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote: do you have access to the surfaces before they were converted to gii? On Wed, 8 Jul 2015, Matteo Bastiani wrote: Hi Bruce, yes. With both surfaces (the original hcp '*.pial.surf.gii’ and the one I

Re: [Freesurfer] mris_fill on HCP data

2015-07-08 Thread Matteo Bastiani
, Matteo On 8 Jul 2015, at 16:52, Bruce Fischl fis...@nmr.mgh.harvard.edu wrote: Hi Matteo what happens if you use our surface format? Does it work properly? Bruce On Wed, 8 Jul 2015, Matteo Bastiani wrote: Hi all, I have been trying to use the mris_fill function on some Human