Thanks Martin,
Yes, the label is from Qdec in first time point space I have done the
following:
1) mri_label2label --srclabel rh_roi --srcsubject fsaverage --trgsubject
1003_1.long.temp_1003 --trglabel rh_roi --regmethod surface --hemi rh
(For all the subj_1.long.temp_subj and
Hi,
it says it is skipping the lh.transversetemporal.stats not sure why. This is
not specifically related to longitudinal though, so maybe someone else can help.
Thanks, Martin
On May 29, 2015, at 3:49 AM, amirhossein manzouri a.h.manzo...@gmail.com
wrote:
Thanks Martin,
Yes, the
Thanks Doug,
I am trying to extract mean thickness from the ROI but I get the following
error :
amir% aparcstats2table --hemi lh --subjects `cat list5.txt` --parc
transversetemporal --meas thickness --skip --tablefile lh.Cth.roi.txt
SUBJECTS_DIR : /Applications/freesurfer/subjects/longBO
Hi Amirhossein,
where exactly is your label. If it is in the first time point, then how
did it get there?
I think it is probably in fsaverage space (where the first time points
were mapped to perform your QDEC analysis). In that case use
mri_label2label from fsaverage to the individual base
Hi All,
I have created two ROIs from first time point Qdec group comparison. I need
to use this ROI labels to extract the thickness from tp1 and tp2 registered
to base (template) subjects(from longitudinal pipeline).
Would you please let me how can I convert the label from 1st time point
space to
Use mri_label2label. Run it with --help to get more info
doug
On 05/27/2015 05:08 AM, amirhossein manzouri wrote:
Hi All,
I have created two ROIs from first time point Qdec group comparison. I
need to use this ROI labels to extract the thickness from tp1 and tp2
registered to base
