Re: [Freesurfer] Cannot run unpacksdcmdir on buckner_data/014-anon

2014-01-07 Thread Anders Olsen
Hi Doug, I ran the command you suggested and it appears to run without any errors or warnings. *OUTPUT: * anders@debian:~/freesurfer_dicom/buckner_data/tutorial_subjs/014-anon$ mri_convert 001.dcm

[Freesurfer] Cannot run unpacksdcmdir on buckner_data/014-anon

2014-01-06 Thread Anders Olsen
Hello FreeSurfer team. I am currently trying to learn the general usage of FreeSurfer and have run into problems with unpacking DICOM files. When I run: unpacksdcmdir -src ~/freesurfer_dicom/buckner_data/tutorial_subjs/014-anon -targ ~/fs_subjects/014-anon -scanonly

Re: [Freesurfer] Cannot run unpacksdcmdir on buckner_data/014-anon

2014-01-06 Thread Douglas N Greve
Not sure. Try running mri_convert 001.dcm deleteme.mgh if it fails, capture the screen output and send it to the list doug On 01/06/2014 06:31 PM, Anders Olsen wrote: Hello FreeSurfer team. I am currently trying to learn the general usage of FreeSurfer and have run into problems with