Re: [Freesurfer] Difference between 2 ways to set up fsgd file and contrasts

2024-05-08 Thread Douglas N. Greve
They are not identical, forĀ  sure. In general, I discourage people from modeling categorical variables (eg, Group1/2 below) as continuous variables because you make assumptions that might not be reasonable (eg, females will have twice the thickness as males). I would use the first method. On

[Freesurfer] Difference between 2 ways to set up fsgd file and contrasts

2024-05-02 Thread Lydia Chung
External Email - Use Caution Hi FS support team, I am going to be using mri_glmfit to test 1) main effects (which regions show differences in cortical thickness between group 1 and group 2) and 2) interaction effects (does the relationship between IV and DV depend on moderator).