You can use a PARCSFILE. Run aparcstats2table with --help to get more info
On 9/14/19 3:30 PM, vin rasa wrote:
External Email - Use Caution
Dear Freesurfer experts,
Is there a shortcut to extract mean thickness(ThickAvg) and std (ThickStd) from
rh/lh.aparc.stats for let's say 4
External Email - Use Caution
Dear Freesurfer experts,
Is there a shortcut to extract mean thickness(ThickAvg) and std (ThickStd)
from rh/lh.aparc.stats for let's say 4 structures only.
I found aparcstats2table command, which seems to extract all the segmented
regions.