That red dot is fine. I bigger question is why you are using a
development version from July 2016? The development versions are often
unstable.
On 03/06/2017 05:27 PM, Martin Juneja wrote:
> Hi Dr. Greve,
>
> I looked at the medial wall area in lh.MEQ_area.10.mgh and noticed a
> small cluster
Hmm, something is going wrong because medial wall areas should have been
masked out. Take a look at the medial wall area in lh.MEQ_area.10.mgh
file with something like
tksurferfv fsaverage lh inflated -aparc -ov lh.MEQ_area.10.mgh -fminmax
.001 .1
scroll through the subjects to see if you see
Hi Dr. Greve,
I am using following commands:
recon-all -all -subject S01 -i T1w_S01.nii -qcache
mris_preproc --fsgd MEQ.fsgd --target fsaverage --hemi lh --meas area --out
lh.MEQ_area.mgh
mri_surf2surf --hemi lh --s fsaverage --sval lh.MEQ_area.mgh --fwhm 10
--cortex --tval lh.MEQ_area.10.mgh
I think you might be doing something wrong during preprocessing. Can you
send your command lines?
On 03/06/2017 12:11 PM, Martin Juneja wrote:
> Hello experts,
>
> I am trying to correlate cortical surface area measure with behavioral
> measures using instructions from here:
>
