Re: [Freesurfer] Hippocampal Subsectioning

2014-07-13 Thread Marcos Martins da Silva
Hi, Joshua Just answered this to Mohammad Zia in a previous message and I guess it is useful to you. 1- The name Right-Hippocampus is misleading you. The hippocampal subfields segmentation is atlas based. And the atlas was generated from expert manual segmentation. The problem is that the most

[Freesurfer] Hippocampal Subsectioning

2014-07-11 Thread Joshua S
Hi, I was doing a hippocampal subsectioning https://surfer.nmr.mgh.harvard.edu/fswiki/HippocampalSubfieldSegmentation on a data set. Previously recon-all -all was used, and then I did recon-all -hippo-subfields. I then used the script kvlQuantifyHippocampalSubfieldSegmentations.sh to find the

Re: [Freesurfer] Hippocampal Subsectioning

2014-07-11 Thread Eugenio Iglesias
- Original Message - From: Joshua S nitrosomonas...@gmail.com To: freesurfer@nmr.mgh.harvard.edu Sent: Friday, July 11, 2014 5:46:59 PM Subject: [Freesurfer] Hippocampal Subsectioning Hi, I was doing a hippocampal subsectioning on a data set. Previously recon-all -all was used