Re: [Freesurfer] How to measure the cortical thickness in tumor patients?

2019-10-09 Thread Bruce Fischl
Hi James I think the -lh/-rh flags are for processing single (ex vivo) hemis, not for only processing one hemi in a whole-brain image. If you want to erase the hemi with the tumor it will probably work cheers Bruce On Wed, 9 Oct 2019, 王子谦 wrote: External Email - Use Caution  

[Freesurfer] How to measure the cortical thickness in tumor patients?

2019-10-09 Thread 王子谦
External Email - Use Caution Dear developers, right now I'm trying to measure the cortical thickness of the right hemisphere in the left side tumor patients. Here I met some problem. Since the complex intensities in the tumor, it makes the 'recon-all -all' command to be very time