Re: [Freesurfer] Issue with mri_glmfit-sim

2024-01-19 Thread Douglas N. Greve
bject: *Re: [Freesurfer] Issue with mri_glmfit-sim I think v6 might be broken when using -bg. Try removing that. On 1/8/2024 11:19 AM, O'Neill, Alexandra Grace wrote:  Hello FS community, To correct for multiple comparisons for the results of a parametric modulation GLM analysis,

Re: [Freesurfer] Issue with mri_glmfit-sim

2024-01-19 Thread O'Neill, Alexandra Grace
Hi Doug, Thanks so much for getting back to me. Below is our previous correspondence: From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Date: Friday, January 12, 2024 at 4:19 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Issue with mri_glmfit-sim

Re: [Freesurfer] Issue with mri_glmfit-sim

2024-01-19 Thread Douglas N. Greve
Sorry, I already forgot  what the problem was. Can you include our previous correspondence? Also, make sure to reply to the list. Thanks! On 1/19/2024 10:07 AM, O'Neill, Alexandra Grace wrote: Hi Doug, Thank you for getting back to me. Unfortunately, the issue is persisting, and the command

Re: [Freesurfer] Issue with mri_glmfit-sim

2024-01-12 Thread Douglas N. Greve
I think v6 might be broken when using -bg. Try removing that. On 1/8/2024 11:19 AM, O'Neill, Alexandra Grace wrote: *Hello FS community,* * To correct for multiple comparisons for the results of a parametric modulation GLM analysis, I have run mri_glmfit-sim using Freesurfer version 6.0 with

[Freesurfer] Issue with mri_glmfit-sim

2024-01-08 Thread O'Neill, Alexandra Grace
Hello FS community, To correct for multiple comparisons for the results of a parametric modulation GLM analysis, I have run mri_glmfit-sim using Freesurfer version 6.0 with the following command: mri_glmfit-sim \ --debug --glmdir