Re: [Freesurfer] Left hemisphere

2017-03-28 Thread Douglas N Greve
use -hemi lh when running recon-all On 03/28/2017 03:09 PM, yusif Al-kheder wrote: > Sorry for the confusion I got mixed up between simnibs and FreeSurfer, how > would I be able to recreate just the left hemisphere of the brain using > FreeSurfer? > > Youssif > >> On Mar 28, 2017, at 3:05 PM,

Re: [Freesurfer] Left hemisphere

2017-03-28 Thread yusif Al-kheder
Sorry for the confusion I got mixed up between simnibs and FreeSurfer, how would I be able to recreate just the left hemisphere of the brain using FreeSurfer? Youssif > On Mar 28, 2017, at 3:05 PM, Douglas N Greve > wrote: > > what is mri2mesh? If it is not our

Re: [Freesurfer] Left hemisphere

2017-03-28 Thread Douglas N Greve
what is mri2mesh? If it is not our program, then you're on your own On 03/28/2017 03:04 PM, yusif Al-kheder wrote: > Yes it's the latter would the command be mri2mesh -hemi lh *subject name *nii > file? > > Youssif Alkheder > >> On Mar 28, 2017, at 2:38 PM, Douglas N Greve

Re: [Freesurfer] Left hemisphere

2017-03-28 Thread yusif Al-kheder
Yes it's the latter would the command be mri2mesh -hemi lh *subject name *nii file? Youssif Alkheder > On Mar 28, 2017, at 2:38 PM, Douglas N Greve > wrote: > > do you mean the subject only has a left hemi or that you just don't want > to process the right hemi?

Re: [Freesurfer] Left hemisphere

2017-03-28 Thread Bruce Fischl
can you explain more about what you are trying to do? On Tue, 28 Mar 2017, yusif Al-kheder wrote: > Hello is it possible to just create the left hemisphere with white and grey > matter intact? > > Youssif AlKheder > > Youssif Alkheder > ___ >

Re: [Freesurfer] Left hemisphere

2017-03-28 Thread Douglas N Greve
do you mean the subject only has a left hemi or that you just don't want to process the right hemi? If the latter, then you can specify -hemi lh On 03/28/2017 02:16 PM, yusif Al-kheder wrote: > Hello is it possible to just create the left hemisphere with white and grey > matter intact? > >

[Freesurfer] Left hemisphere

2017-03-28 Thread yusif Al-kheder
Hello is it possible to just create the left hemisphere with white and grey matter intact? Youssif AlKheder Youssif Alkheder ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The