Re: [Freesurfer] PETsurfer: --usf in gtmseg

2020-05-27 Thread Douglas N. Greve
yes, that controls how finely the surface-based segmentations are resampled into the volume. The surface is semi-continuous so you can sample them into the volume as finely as you like. 0.5mm seems to work fine. On 5/26/2020 4:33 PM, Julie Ottoy wrote: External Email - Use Caution

[Freesurfer] PETsurfer: --usf in gtmseg

2020-05-26 Thread Julie Ottoy
External Email - Use Caution Hi, In PETsurfer gtmseg, there is the --usf (upsampling factor) which is by default 2, corresponding to 0.5 mm voxelsize. I was wondering if the usf is recommended to be chosen depending on your mri voxelsize (eg, usf 1 for 1mm voxelsize of the mri),