Dear Doug,
Some time ago we e-mailed about the optimazation of the timing ou our
experimental design. Based on that conversation I have used the folling
command line:
--ntp 255 --tr 2.0 --tprescan 4.0 --psdwin 0.0 16.0 1.0 --ev Gain2 4.0 8.0
--ev Gain4 4.0 8.0 --ev Gain6 4.0 8.0 --ev Gain8 4.0
Dear Doug,
Thank you for your explanations and suggestions. I tested the code under
the new Optseq version and it seems to generate proper output now.
Thanks a lot!
Best regards,
Laura
2013/6/21 Douglas Greve gr...@nmr.mgh.harvard.edu:
On 6/20/13 5:55 AM, Laura Dekkers wrote:
Dear Doug,
Dear Doug,
Thank you for your e-mail.
As you suggested, we changed tnullmax to 6 sec and run the following code
in Optseq:
--ntp 255 --tr 2.0 --tprescan 4.0 --psdwin 0.0 16.0 1.0 --ev Gain2 4.0 8.0
--ev Gain4 4.0 8.0 --ev Gain6 4.0 8.0 --ev Gain8 4.0 8.0 --ev Loss2 4.0 8.0
--ev Loss4 4.0 8.0 --ev
On 6/20/13 5:55 AM, Laura Dekkers wrote:
Dear Doug,
Thank you for your e-mail.
As you suggested, we changed tnullmax to 6 sec and run the following
code in Optseq:
--ntp 255 --tr 2.0 --tprescan 4.0 --psdwin 0.0 16.0 1.0 --ev Gain2 4.0
8.0 --ev Gain4 4.0 8.0 --ev Gain6 4.0 8.0 --ev Gain8 4.0
Hi Donna, on the 2nd command line you need to change --tnullmax to 7 sec
to be compatible with the 1st command line. I ran this and it works.
doug
On 6/11/13 8:45 AM, Laura Dekkers wrote:
Dear Doug,
Thanks you for your e-mail and sorry for the inconvenience. Here is
the code again.
In
Dear Doug,
Thanks you for your e-mail and sorry for the inconvenience. Here is the
code again.
In this line of code we included the fixed duartion of the fix (1.0) in the
event duration specification (summing to 5.0) and asked Optseq to insert
null events of a minimum duration of 0.0 in 25% of
Dear Doug,
Thank you for your e-mail. Please find attached our command line.
We felt that the first two lines of code should essentially yield the same
timing of events. In the first we included the fixed duration of the fix
(1.0) in our event duration (4.0) and meant to ask for extra null
Hi Laura, what is your command line?
doug
On 06/04/2013 09:02 AM, Laura Dekkers wrote:
Dear Dr Greve,
Together with Dr Hilde Huizenga I am implementing an fMRI study in
which we would like to optimize the design by using Optseq2. We have a
few questions. Could you please help us out?
Dear Dr Greve,
Together with Dr Hilde Huizenga I am implementing an fMRI study in which we
would like to optimize the design by using Optseq2. We have a few
questions. Could you please help us out?
Our task consists of 3 runs of 72 trails each, in which participants are
presented with a fixation
