RE: [Freesurfer] QDEC data into FSL

2008-12-12 Thread Alexandru Hanganu
:16:15 Uhr Betreff: Re: [Freesurfer] QDEC data into FSL Alexandru, I can't say i've seen this done before, but i think what you would do is use mri_surf2vol to map the sig.mgh file back into your subject volume space. you would need a register file to do this, but it is included with a standard

[Freesurfer] QDEC data into FSL

2008-12-10 Thread Alexandru Hanganu
Hello All, Can you please tell me, when we get the results from QDEC {$SUBJECTS_DIR/qdec/Untitled/lh-Avg-thickness-age-Cor/sig.mgh} how can we threshold the image and include it as a seed into FSL tractography ? What command line should I use ? Thank you for your help, Best regards, Alexandru