Re: [Freesurfer] Talairach Failed: Distorted T1

2021-04-18 Thread Douglas N. Greve
*To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] Talairach Failed: Distorted T1 Sorry, what is the brainstem.dat file? Is that something we create? On 4/6/2021 7:53 PM, Harkey, Thomas Jarrott wrote: External Email - Use Caution Douglas, Thanks again. Is this value in the brainstem.dat

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-04-16 Thread Harkey, Thomas Jarrott
From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Wednesday, April 14, 2021 9:25 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Talairach Failed: Distorted T1 Sorry, what is the brainstem.dat file? Is that something we

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-04-14 Thread Douglas N. Greve
...@nmr.mgh.harvard.edu on behalf of Harkey, Thomas Jarrott *Sent:* Tuesday, March 30, 2021 6:03 PM *To:* Freesurfer support list *Subject:* Re: [Freesurfer] Talairach Failed: Distorted T1 External Email - Use Caution Douglas, Thank you for your help. Another question. The FreeSurfer wiki

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-04-06 Thread Harkey, Thomas Jarrott
regards, Thomas Harkey UAMS College of Medicine M3 From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Thursday, March 25, 2021 9:48 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Talairach Failed: Distorted T1

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-04-05 Thread Douglas N. Greve
*From:* freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve *Sent:* Thursday, March 25, 2021 9:48 PM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] Talairach Failed: Distorted T1 That is an axial scan that only covers 25mm of the brain inferior-superior

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-03-30 Thread Harkey, Thomas Jarrott
Harkey UAMS College of Medicine M3 From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Thursday, March 25, 2021 9:48 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Talairach Failed: Distorted T1 That is an axial

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-03-25 Thread Douglas N. Greve
...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve *Sent:* Thursday, March 25, 2021 9:11 AM *To:* freesurfer@nmr.mgh.harvard.edu *Subject:* Re: [Freesurfer] Talairach Failed: Distorted T1 It looks like something is wrong with your input. For starters, the voxel size looks huge. Run mri_info subject

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-03-25 Thread Harkey, Thomas Jarrott
of 2022 From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Douglas N. Greve Sent: Thursday, March 25, 2021 9:11 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Talairach Failed: Distorted T1 It looks like something is wrong with your input

Re: [Freesurfer] Talairach Failed: Distorted T1

2021-03-25 Thread Douglas N. Greve
It looks like something is wrong with your input. For starters, the voxel size looks huge. Run mri_info subject/mri/orig/001.mgz and send the result On 3/23/2021 10:54 PM, Harkey, Thomas Jarrott wrote: External Email - Use Caution Hello, My name is Thomas Harkey and I am conducting