Re: [Freesurfer] Using MRI_segstats to calculate grey matter intensity

2024-02-23 Thread Douglas N. Greve
Yes, you just have to make sure the input and seg volumes are in voxel for voxel alignment On 2/21/2024 4:30 AM, ERNEST KISSI wrote: External Email - Use Caution Hello freesurfer Team, I have the grey matter segmentation from FSL and I have freesurfer recon-all output but the recon-

[Freesurfer] Using MRI_segstats to calculate grey matter intensity

2024-02-21 Thread ERNEST KISSI
External Email - Use Caution Hello freesurfer Team, I have the grey matter segmentation from FSL and I have freesurfer recon-all output but the recon-all outputs do not have regional grey matter intensities. Can I use MRI_segstats to calculate the regional grey matter output using