ops. I guess that should have been obvious to me!
Thanks!
Dorit
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Hi Dorit,
The reason why the colors look off is that mri_aparc2aseg will
automatically add 1000 for left cerebral cortex and add 2000 for right
cerebral cortex. Therefore, for example, a left hemisphere voxel in network
5 will have a value of 1005 in your test.mgz. Here is my suggestion:
1. Find
Hi,
I’m trying to use the Yeo2011 annotations to create individual volume masks in
subject space.
I first use mri_surf2surf to map the annotations from fsaverage to individual
subjects:
mri_surf2surf --srcsubject fsaverage --trgsubject subject --hemi rh
--sval-annot