Re: [Freesurfer] display ROI mean values for FS atlas

Hi Douglas, Thanks very much. This solution works well. Best, Xiangzhen On Tue, Mar 28, 2017 at 6:42 PM, Douglas N Greve wrote: > Try annotval2surfoverlay.m in v6. If you don't have v6, you can get it > from here > >

Re: [Freesurfer] display ROI mean values for FS atlas

Try annotval2surfoverlay.m in v6. If you don't have v6, you can get it from here https://gate.nmr.mgh.harvard.edu/safelinks/greve/annotval2surfoverlay.m On 03/27/2017 05:47 PM, Bruce Fischl wrote: > so you want to color each parcellation unit with the same color on say > the fsaverage

Re: [Freesurfer] display ROI mean values for FS atlas

Hi Bruce, Thanks very much for your email. Yes, I want to color each area with the same color accroding the Z scores, and on the fsaverage surface. I have one solution which transfer Z scores to RGB for displaying, but I think that solution would not be suitable for cases with both positive and

Re: [Freesurfer] display ROI mean values for FS atlas

so you want to color each parcellation unit with the same color on say the fsaverage surface? I think people have done that, so hopefully someone else has instructions for you cheers Bruce On Mon, 27 Mar 2017, X K wrote: Hi, I am doing a project with the Desikan-Killiany atlas. After

[Freesurfer] display ROI mean values for FS atlas

Hi, I am doing a project with the Desikan-Killiany atlas. After some ROI analysis, I've got some values for each area. Now I want to display these values in the brain 3D space. The values are Z statistic scores, so there are both positive and negtive values (I want Z=0 to be in the middle of the