Re: [Freesurfer] kvl binaries missing from ppc 5.1 stable release

2012-09-10 Thread Nick Schmansky
Fidel, Sorry, but the GEMS tools are not built for our mac powerpc distribution. we no longer support that platform (or at least we dont make an effort to build the entire freesurfer toolset on it). Our focus is now on getting a 64b Mac (Mountain) Lion build working. Nick Hi Nick, I run

Re: [Freesurfer] kvl binaries missing from ppc 5.1 stable release

2012-09-10 Thread Anthony Dick
Hello--was just thinking about upgrading to Mountain Lion. Am I to assume freesurfer will not work if I do this? Anthony On 9/10/12 11:58 AM, Nick Schmansky wrote: Fidel, Sorry, but the GEMS tools are not built for our mac powerpc distribution. we no longer support that platform (or at

Re: [Freesurfer] kvl binaries missing from ppc 5.1 stable release

2012-09-10 Thread Nick Schmansky
Anthony, Our Leopard build should work on Mountain Lion, although I havent confirmed this. It works on Lion. The Leopard build is 32b, so some stuff which can use 4GB of memory (like mri_cvs_register) will fail due to inability to alloc memory. Nick On Mon, 2012-09-10 at 12:04 -0400, Anthony

Re: [Freesurfer] kvl binaries missing from ppc 5.1 stable release

2012-09-10 Thread Shannon Buckley
: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Nick Schmansky Sent: Monday, September 10, 2012 1:46 PM To: Anthony Dick Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] kvl binaries missing from ppc 5.1 stable release Anthony, Our Leopard

[Freesurfer] kvl binaries missing from ppc 5.1 stable release

2012-08-31 Thread Fidel Vila
Hi Nick, I run recon-all and worked well, but then I added the hippo-subfields flag and quitted with errors. The hippo-subfields.log says kvlSegmentHippocamlSubfields.sh: Command not found. I went into the bin folder and all the kvl files are missing. Advice will be appreciate it. Thanks,