Hi Tommi, convert the w file to an mgz with mri_surf2surf. Specify the
source format with --sfmt w
doug
r...@nmr.mgh.harvard.edu wrote:
Hi Doug and Matti,
I am using mri_surfcluster to threshold and extract ROIs from MEG/EEG
source analysis data. The same code used to work fine in Jan 2009,
Hi Doug,
I am still receiving a similar error. mri_surf2surf inputes the w file
and writes out a mgz file and exits apparently ok. However, mri_volcluster
still exits with
could not read test-lh.mgz as type
Details:
mri_surf2surf \
--srcsubject Wyss_000 \
--trgsubject Wyss_000 \
--hemi lh \
It looks like that file does not exist:
ls /autofs/cluster/scratch/monday/raij/MEEG/test-lh.mgz
ls: /autofs/cluster/scratch/monday/raij/MEEG/test-lh.mgz: No such file
or directory
r...@nmr.mgh.harvard.edu wrote:
Hi Doug,
I am still receiving a similar error. mri_surf2surf inputes the w file
Oops - my bad, on this last round I mixed one filename dash with a dot.
Works now - so (just to remind myself) the new feature is to use
mri_surf2surf to convert from w to mgz before running mri_surfcluster.
Thanks Doug! :) -Tommi
It looks like that file does not exist:
ls
Hi Doug and Matti,
I am using mri_surfcluster to threshold and extract ROIs from MEG/EEG
source analysis data. The same code used to work fine in Jan 2009, but now
I am running into unexpected errors. I wonder if something happened along
the way of FreeSurfer and/or MNE stream upgrades and now
