[Freesurfer] mri_synthseg error...

2023-03-23 Thread Gonzalo Rojas Costa
External Email - Use Caution Hi: I installed the 22 march freesurfer developer version. I test mri_synthseg with a CT image, but it shows me the following error: "mri_synthseg --i /home/developer/Documents/sub-0001/H2.nii.gz --o /home/developer/Documents/sub-0001 --cpu --ct

Re: [Freesurfer] mri_synthseg ERROR 'std::bad_alloc'

2023-03-17 Thread fsbuild
External Email - Use Caution Various postings reference it’s related to the application failing to obtain memory. That does not necessarily mean virtual/physical memory is exhausted, but rather the memory management scheme used by the application is unable to provide a big

[Freesurfer] mri_synthseg ERROR 'std::bad_alloc'

2023-03-17 Thread Steinbacher Jürgen
External Email - Use Caution Dear Freesurfer team, I have now fs 7.3.2 installed on ubuntu 22.04.2 on a 8 core i7-4790 CPU (supporting AVX instructions) with 28.0Gb fs works fine now, but I had a patient where the segmentation did not work well, so I wanted to try