Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

Hi Douglas, Thank you for the response. I didn't know I couldn't do it without the command line. I will try it and think like this should work. Best, Max On 21/01/2016, at 18:57, Douglas N Greve wrote: > As the error message says, you can only have two levels. With 3 levels, > you must

Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

As the error message says, you can only have two levels. With 3 levels, you must use the "command line" stream, ie, mris_preproc, mri_surf2surf, mri_glmfit, and mri_glmfit-sim. There are tutorials on the wiki. On 01/20/2016 08:53 AM, BAUTISTA-PERPINYA Maximilià wrote: > Thank you for the reply

Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

Thank you for the reply Douglas, Factor 1 (diagnosis) has 3 levels (BPD, CCP, NPC). I created using the vi editor, one line for each level. Same as factor 2. Max On dijous 14 gener 2016 22:20 CET, Douglas N Greve wrote: > how many levels does factor 1 have?

Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

Thank you for the reply Douglas, Factor 1 (diagnosis) has 3 levels (BPD, CCP, NPC). I created using the vi editor, one line for each level. Same as factor 2. Max On dijous 14 gener 2016 22:20 CET, Douglas N Greve wrote: > how many levels does factor 1 have?

Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

I have the same problem. I observed that this error appears when you select a factor with 3 or more levels. Factors of 2 levels works fine. 2016-01-18 9:32 GMT+01:00 BAUTISTA-PERPINYA Maximilià < maximila.bautista-perpi...@etu.unistra.fr>: > Thank you for the reply Douglas, > > Factor 1

[Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

Hi there experts, I'm runing qdec to analyze my subject data. I am able to import the qdec.table.dat, but the problem comes in the Design step. I select 'Volume-based' measure, 'Diagnosis' as my discrete independent variable and 'LeftAmygdala' as the continuous variable. I don't select any

Re: [Freesurfer] QDEC. Error in Analyze: command failed: mri_glmfit

how many levels does factor 1 have? How did you make the factor file? On 01/14/2016 05:30 AM, BAUTISTA-PERPINYA Maximilià wrote: > Hi there experts, > > I'm runing qdec to analyze my subject data. I am able to import the > qdec.table.dat, but the problem comes in the Design step. I select >

[Freesurfer] Qdec Error in analyze: command failed

Hi, I'm getting an error in analyze: command failed: mri_concat notification when trying to run qdec on a within subjects analysis (N=29, looking at thickness and social functioning whilst controlling for ICV). I'm not sure what this means. See the output below. Thanks! Laura. Data table

[Freesurfer] qdec error in analyze

Dear all, I've come across a similar problem to the one described before in qdec, but cannot find a solution for it, I've previously visualised my data using qdec, but when I tried to run it again I get the following error. I've checked to make sure my subject is named correctly and I am in

Re: [Freesurfer] qdec error in analyze

Prapti, Try deleting the directory 'qdec/Untitled' and run it again. Prior to v4.2.0, qdec did not delete that directory, which is the default working directory, so its possible some incompatible files from a prior run were lingering. Nick On Thu, 2009-03-05 at 09:42 +1100, Prapti Gautam

RE: [Freesurfer] qdec error in analyze

Deleting 'qdec/Untitled' worked! Thanks, Prapti -Original Message- From: Nick Schmansky [mailto:ni...@nmr.mgh.harvard.edu] Sent: Thursday, 5 March 2009 11:10 AM To: Prapti Gautam Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] qdec error in analyze Prapti, Try deleting

RE: [Freesurfer] qdec error in analyze

: Nick Schmansky [mailto:ni...@nmr.mgh.harvard.edu] Sent: Thursday, 5 March 2009 11:10 AM To: Prapti Gautam Cc: Freesurfer Mailing List Subject: Re: [Freesurfer] qdec error in analyze Prapti, Try deleting the directory 'qdec/Untitled' and run it again. Prior to v4.2.0, qdec did not delete