Hi Dimitri,
Could you indicate the recon command that you ran? You could try rerunning the
recon-all command in the directory with one of the dicom files for the T1 image.
I’ve posted an example command below:
recon-all -all -i I50 -s Subj001
• The file after the “-i” flag indicates your
Hi Luisa,
There seems to be an error opening the T1.mgz file. Is there a T1.mgz file in
your mri folder?
Best,
Jocelyn
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Bohorquez Montoya, Luisa
Sent: Monday, January 18, 2021 10:58 AM
To: Freesurfer
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Hello,
We're seeing this error a lot: "Cannot find rh.white.H" which is generated
here
Hi Andy
I think the rh.white.H is generated by mris_curvature. Does that help?
Cheers,
Bruce
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Andy Worth
Sent: Tuesday, January 19, 2021 5:29 PM
To: Freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Cannot find rh.white.H
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Hi there
If I want to run some HCP subjects that are 0.5mm iso T1w scans (MPRAGE) in
FreeSurfer 7.1, would I simply use the following flags, or am I missing
something?
-3T -MPRAGE -hires
Do we need an expert file with version 7.1 to specify the
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We are happy to announce that the Positron emission tomography BIDS extension
is finally nearing it’s completion. Hence, we are seeking final community
feedback for the PET BIDS standard. We are looking for feedback on GitHub and
specifically to the
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Hi Kersten,
I followed your mail and even also I got stuck at the contrast matrix i.e
CM:
I have given the code below which I used to execute the longitudinal
pipeline.
[aseg, asegrows,asegcols] = fast_ldtable(['aseg.long.table']);
