Re: [Freesurfer] tkmedit and tksurfer error

Hi Nick, After unsetting TCLLIBPATH ..fsl works. i have the FC4x86_64 binary version of FSL 3.3.7 which is running on FC5. I wonder if running FC4version on FC5 is the problem and that i've to download the source and build it on FC5.Like you said,there's a conflict between FS and FSL's TCL

[Freesurfer] subject failed autorecon1

Hi all, One of my subjects failed autorecon1 giving me this error: mri_normalize -g 1 nu.mgz T1.mgz using max gradient = 1.000 reading from nu.mgz... normalizing image... talairach transform 0.646 0.464 -0.179 -16.319; -0.497 0.598 -0.245 -56.371; -0.008 0.303 0.757 179.232;