[Freesurfer] [Freesurfer/FSFAST]

Hi, I am running preproc-sess on one subject. I got the following error after running preproc-sess: Error: niiRead(): error reading from /Users/Studies/Directory/Study_Directory/sess01/bold/001/f.nii My PWD: /Users/Studies/Directory/Study_Directory My echo $SUBJECTS_DIR:

Re: [Freesurfer] Freesurfer for canine

To my knowledge, it does not work with canine data, but maybe someone has done it. On 04/02/2018 04:41 PM, Khoi Mai wrote: > Hi, > > I am interested in the automated volumetric analysis for canine. My > question is how can we go about adjusting the pipeline to accommodate > canine data. > >

[Freesurfer] Freesurfer for canine

Hi, I am interested in the automated volumetric analysis for canine. My question is how can we go about adjusting the pipeline to accommodate canine data. Thank you for your reply Best, Khoi ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu

Re: [Freesurfer] mirroring fsaverage labels between hemispheres

If you have a label defined on the lh or rh of fsaverage, you can map it to the contralateral hemi with something like mris_apply_reg --src-label lh.your.label --streg lh.sphere.left_right rh.sphere.left_right --trg rh.your.label where the left_right files are in fsaverage/surf On 3/29/18