[Freesurfer] Moderation analysis in Freesurfer

External Email - Use Caution Dear Freesurfer experts, We are interested in looking at the moderating effect of grey matter thickness on a non-imaging outcome measure. Thus, the model would be: Outcome measure = Condition + GM thickness + Condition * GM thickness +

Re: [Freesurfer] Hypothalamus

Hi Zheng sorry, but hypothalamus is not a segmentation target of ours yet. It is on our list though cheers Bruce On Wed, 27 Jun 2018, 郑凤莲 wrote: External Email - Use Caution Hi FS experts, I want to study the volume changes of Hypothalamus in FS 6.0. However, I cannot

[Freesurfer] mri_glmfit for first level ?

External Email - Use Caution Dear Freesurfer experts, I would like to know whether mri_glmfit can be used to estimate first-level (single subject) models as well or whether it is clearly not intended/recommended for that. I have noticed that it allows to specify a design matrix

Re: [Freesurfer] Best way to elaborate multiple .nii file for multiple subjects

External Email - Use Caution Thanks Sir 2018-06-26 9:33 GMT+02:00 Giuseppe Cabras : > Hi Ottavio, > > you can also install gnu parallel (https://www.gnu.org/software/parallel/) > and run in parallel on all your cpus with just one parallel command line: > > export

[Freesurfer] Recon-all run time too long

External Email - Use Caution Hi!I have a macbook pro MY 2014 with a Intel Core i7(quad core,2.7 ghz) and 16 gb of ram with El Capitan.This Macbook to run recon-all it takes 47 hours with -openmp 8 flag. A Dell with Intel Core i7 3632Q,8 GB RAM DDR3 1600mhz with Linux takes 8

[Freesurfer] Hypothalamus

External Email - Use Caution Hi FS experts, I want to study the volume changes of Hypothalamus in FS 6.0. However, I cannot find information about Hypothalamus in Wiki. Is there any description about Hypothalamus? I am looking forward to your reply. Thank you very much.