External Email - Use Caution
Hi FreeSurfer Experts,
Reposting this message.
I am trying to correct for multiple comparisons by running a permutation for a
non-orthogonal design. Based on reading through the blog, I came up with the
following script:
mri_glmfit-sim --glmdir rh.
Hi Kim
are you really sure that you want to use analyze format? I doesn't keep
track of the direction cosines properly so once you go to it it is hard to
know left from right. SPM should be fine with nifti. In any case
conversion should be something like:
mri_convert file.mgz file.nii
or
Dear expert,
I'd like to convert .mgz (or .nii) file to .hdr file (.hdr and .img) to use
.hdr in SPM software.
I tried to convert the file using "mri_convert". But, there were the error
messages below.
Please, let me know how to onvert .mgz (or .nii) file to .hdr file (.hdr and
.img).
1) conv
External Email - Use Caution
Hi,
I want to extract hippocampal subfield volume from longitudinal samples. I
ran recon-all-all with longitudinal pipeline for all those samples in
FreeSurfer
6.0.
How I need to process further (Commands that I need to follow).
Would you please help
